RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 OGFOD2Q6N063 350 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 TIGD7Q6NT04 549 aaPredicted RBP16.56■□□□□ 0.24
CNOT3-208ENST00000613073 C10orf107Q8IVU9 208 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 CMTM5Q96DZ9 223 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 DEFB118Q96PH6 123 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 ZYG11BQ9C0D3 744 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 NT5MQ9NPB1 228 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 PLK2Q9NYY3 685 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 SPATA7Q9P0W8 599 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 SLC2A6Q9UGQ3 507 aa16.56■□□□□ 0.24
CNOT3-208ENST00000613073 HTR3EA5X5Y0 456 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 FKTNO75072 461 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 ADAM23O75077 832 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PRKCGP05129 697 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PSMC3P17980 439 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 VEGFBP49765 207 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 RPL26P61254 145 aaKnown RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 SLC10A7Q0GE19 358 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 GPR17Q13304 367 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 AFMIDQ63HM1 303 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 ESRP1Q6NXG1 681 aaKnown RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 NPAS4Q8IUM7 802 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 ZNF683Q8IZ20 524 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 GFM2Q969S9 779 aaKnown RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 MYEOVQ96EZ4 313 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 OSBPL6Q9BZF3 934 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 BIRC5O15392 142 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 VAPBO95292 243 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 GNRH1P01148 92 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 COX4I1P13073 169 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 THOP1P52888 689 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 CD300CQ08708 224 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 SEPT6Q14141 434 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PCLAFQ15004 111 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 TGFBIQ15582 683 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PPM1LQ5SGD2 360 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 CLVS1Q8IUQ0 354 aaPredicted RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PSMG2Q969U7 264 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 RPRD1AQ96P16 312 aaPredicted RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 KIFC1Q9BW19 673 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 IL37Q9NZH6 218 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 SLC39A10Q9ULF5 831 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 ARHGAP26Q9UNA1 814 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 A0A096LPK6 155 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PSMD3O43242 534 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 ZBTB14O43829 449 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 CSPG5O95196 566 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 EPHA3P29320 983 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 ETFBP38117 255 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 CDK9P50750 372 aaKnown RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 NDST2P52849 883 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PFKPQ01813 784 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 CTBP1Q13363 440 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PDAP1Q13442 181 aaKnown RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PCID2Q5JVF3 399 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 DENND6AQ8IWF6 608 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 ATP6V0D2Q8N8Y2 350 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 FAM156AQ8NDB6 213 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 VPS39Q96JC1 886 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 BTN2A3PQ96KV6 586 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 MRGPRX2Q96LB1 330 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 CDRT15Q96T59 188 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 TTPALQ9BTX7 342 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 PRDM5Q9NQX1 630 aaPredicted RBP16.55■□□□□ 0.24
CNOT3-208ENST00000613073 RIMS3Q9UJD0 308 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 COQ6Q9Y2Z9 468 aa16.55■□□□□ 0.24
CNOT3-208ENST00000613073 TLR5O60602 858 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 FGF3P11487 239 aaPredicted RBP16.54■□□□□ 0.24
CNOT3-208ENST00000613073 AVPR1AP37288 418 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 KCNQ1P51787 676 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 GEMP55040 296 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 TRIP4Q15650 581 aaPredicted RBP16.54■□□□□ 0.24
CNOT3-208ENST00000613073 ZNF362Q5T0B9 420 aaPredicted RBP16.54■□□□□ 0.24
CNOT3-208ENST00000613073 MFSD4BQ5TF39 518 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 MBLAC2Q68D91 279 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 PKN3Q6P5Z2 889 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 BHLHE22Q8NFJ8 381 aaPredicted RBP16.54■□□□□ 0.24
CNOT3-208ENST00000613073 SPPL2BQ8TCT7 592 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 ACSS2Q9NR19 701 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 TRNAU1APQ9NX07 287 aaKnown RBP16.54■□□□□ 0.24
CNOT3-208ENST00000613073 FAM92AA1XBS5 289 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 STX16-NPEPL1H3BU86 382 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 TPD52L2O43399 206 aaKnown RBP16.54■□□□□ 0.24
CNOT3-208ENST00000613073 PEX11BO96011 259 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 RHOQP17081 205 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 ATF6P18850 670 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 ARRB2P32121 409 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 NRG1Q02297 640 aaPredicted RBP16.54■□□□□ 0.24
CNOT3-208ENST00000613073 GRM3Q14832 879 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 MAP7D1Q3KQU3 841 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 BORAQ6PGQ7 559 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 CFAP52Q8N1V2 620 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 UMODL1-AS1Q8N2C9 162 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 SP110Q9HB58 689 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 PCDH10Q9P2E7 1040 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 SORCS3Q9UPU3 1222 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 RNF11Q9Y3C5 154 aa16.54■□□□□ 0.24
CNOT3-208ENST00000613073 PLXNA3P51805 1871 aa16.53■□□□□ 0.24
CNOT3-208ENST00000613073 DOCK4Q8N1I0 1966 aa16.53■□□□□ 0.24
CNOT3-208ENST00000613073 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms