RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SNX19Q92543 992 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MAML3Q96JK9 1138 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 GPR22Q99680 433 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 C16orf70Q9BSU1 422 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 BDH2Q9BUT1 245 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MLPHQ9BV36 600 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 POLR1EQ9GZS1 481 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF229Q9UJW7 825 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 UBR3Q6ZT12 1888 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 E9PAM4 449 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 CD3EAPO15446 510 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ADCY6O43306 1168 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 SH3BGRLO75368 114 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF682O95780 498 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TBX18O95935 607 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 UGT1A6P19224 532 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 HOXA11P31270 313 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MS4A2Q01362 244 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 VAC14Q08AM6 782 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 STXBP5Q5T5C0 1151 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 FAM117BQ6P1L5 589 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 C16orf59Q7L2K0 433 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 GPSM1Q86YR5 675 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 CEP97Q8IW35 865 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TNIP2Q8NFZ5 429 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TWIST2Q8WVJ9 160 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 PSMG2Q969U7 264 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MTFMTQ96DP5 389 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 CYP2S1Q96SQ9 504 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC9A7Q96T83 725 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 NFKBIZQ9BYH8 718 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ZBTB26Q9HCK0 441 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ZFP14Q9HCL3 533 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 SCUBE2Q9NQ36 999 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 CRTAC1Q9NQ79 661 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MKS1Q9NXB0 559 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 KCTD3Q9Y597 815 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TRPV2Q9Y5S1 764 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 COL1A2P08123 1366 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 IQCA1LA6NCM1 817 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 A8MT66 165 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 PIP5K1BO14986 540 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MATN3O15232 486 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 DEAF1O75398 565 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 RNASEH2AO75792 299 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 MTHFD1P11586 935 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 CCNCP24863 283 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 RGS4P49798 205 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 LSM3P62310 102 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 NFE2Q16621 373 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TRIM16LQ309B1 348 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ADCK1Q86TW2 530 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 TMCO5AQ8N6Q1 288 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 PHC3Q8NDX5 983 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 OR2T34Q8NGX1 318 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 OR2T3Q8NH03 318 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ITFG1Q8TB96 612 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 RNF217Q8TC41 542 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 KBTBD7Q8WVZ9 684 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 HMCESQ96FZ2 354 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ZYG11BQ9C0D3 744 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 ATP13A1Q9HD20 1204 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 CRLS1Q9UJA2 301 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 BLOC1S6Q9UL45 172 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 FADS3Q9Y5Q0 445 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 DLEC1Q9Y238 1755 aa6.88□□□□□ -1.31
SYNPO2-206ENST00000610556 HS6ST1O60243 411 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 BCL10O95999 233 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC35E2BP0CK96 405 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 FCGR1AP12314 374 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 WARSP23381 471 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 GRK4P32298 578 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 CYP2C18P33260 490 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 YAP1P46937 504 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC11A2P49281 568 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 ZNF135P52742 658 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 AIF1P55008 147 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 MRPS6P82932 125 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 IL5RAQ01344 420 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 CDK18Q07002 472 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 SLC10A7Q0GE19 358 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 ARHGEF7Q14155 803 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 FAM45BPQ6NSW5 357 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 EFL1Q7Z2Z2 1120 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 TMEM135Q86UB9 458 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 MICU2Q8IYU8 434 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 CENPLQ8N0S6 344 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 FAM45AQ8TCE6 357 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 ASPSCR1Q9BZE9 553 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 ABCG8Q9H221 673 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 OLA1Q9NTK5 396 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 DOLKQ9UPQ8 538 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 U3KQV3 271 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 ZCWPW2A0A1B0GU75 182 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 G3V2L1 256 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 AURKAO14965 403 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 JUNP05412 331 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 RHOCP08134 193 aa6.87□□□□□ -1.31
SYNPO2-206ENST00000610556 AKT1P31749 480 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms