RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 SKOR1P84550 965 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 INSM1Q01101 510 aaPredicted RBP10.7□□□□□ -0.7
TUBE1-210ENST00000604967 PPIDQ08752 370 aaKnown RBP10.7□□□□□ -0.7
TUBE1-210ENST00000604967 CDKN3Q16667 212 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 DEFB133Q30KQ1 61 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 LRRC38Q5VT99 294 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 MACC1Q6ZN28 852 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 Q6ZVL8 140 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 TECPR1Q7Z6L1 1165 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 RHOT2Q8IXI1 618 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 PHACTR4Q8IZ21 702 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 ACRBPQ8NEB7 543 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 CCL4L1Q8NHW4 92 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 PDCD6IPQ8WUM4 868 aaKnown RBP10.7□□□□□ -0.7
TUBE1-210ENST00000604967 FATE1Q969F0 183 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 EID2BQ96D98 161 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 HDAC11Q96DB2 347 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 PDXPQ96GD0 296 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 WDR24Q96S15 920 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 AGAP2Q99490 1192 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 IL12RB2Q99665 862 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 FGF22Q9HCT0 170 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 MRPL40Q9NQ50 206 aaKnown RBP10.7□□□□□ -0.7
TUBE1-210ENST00000604967 CHKBQ9Y259 395 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 PCYT1BQ9Y5K3 369 aaPredicted RBP10.7□□□□□ -0.7
TUBE1-210ENST00000604967 APC2O95996 2303 aa10.7□□□□□ -0.7
TUBE1-210ENST00000604967 GOLGA4Q13439 2230 aaKnown RBP10.7□□□□□ -0.7
TUBE1-210ENST00000604967 ANKRD11Q6UB99 2663 aaPredicted RBP10.7□□□□□ -0.7
TUBE1-210ENST00000604967 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 A0A1W2PNU3 283 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 PMS2P1A4D2B8 440 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 CFAP69A5D8W1 941 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 SRRM3A6NNA2 597 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 ZNF487B1APH4 448 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 YY2O15391 372 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 AQP9O43315 295 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 LZTS3O60299 673 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 RFPL3O75679 317 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 C1SP09871 688 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 ELFN1P0C7U0 828 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 CKMT1AP12532 417 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 XPAP23025 273 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 TRIM23P36406 574 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 HSPA9P38646 679 aaKnown RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 HNRNPKP61978 463 aaKnown RBP eCLIP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 YPEL5P62699 121 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 DYNLT1P63172 113 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 PTSQ03393 145 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 IFI16Q16666 785 aaKnown RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 PRRT3Q5FWE3 981 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 PERM1Q5SV97 790 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 ERAP2Q6P179 960 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 GUSBP11Q6P575 273 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 CRTC1Q6UUV9 634 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 DCP2Q8IU60 420 aaKnown RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 SLC35F3Q8IY50 421 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 TPCN2Q8NHX9 752 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 FAM174AQ8TBP5 190 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 LMX1AQ8TE12 382 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 ZCCHC14Q8WYQ9 949 aaKnown RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 TADA1Q96BN2 335 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 SCRN2Q96FV2 425 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 PANX2Q96RD6 677 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 TRIB3Q96RU7 358 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 BOCQ9BWV1 1114 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 TDRD1Q9BXT4 1180 aaKnown RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 C10orf88Q9H8K7 445 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 NLGN3Q9NZ94 848 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 TRIM10Q9UDY6 481 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 APOBEC3BQ9UH17 382 aaKnown RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 RABGEF1Q9UJ41 708 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 PCDHGA1Q9Y5H4 931 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 HEY1Q9Y5J3 304 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 EPN1Q9Y6I3 576 aaPredicted RBP10.69□□□□□ -0.7
TUBE1-210ENST00000604967 ZFYVE26Q68DK2 2539 aa10.69□□□□□ -0.7
TUBE1-210ENST00000604967 BPTFQ12830 3046 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 A0A0J9YYE9 177 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 TRABD2BA6NFA1 517 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 NDUFA10O95299 355 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 TRBC1P01850 177 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 TPM1P09493 284 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 VIPR1P32241 457 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 CD68P34810 354 aaPredicted RBP10.68□□□□□ -0.7
TUBE1-210ENST00000604967 CD86P42081 329 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 POLD2P49005 469 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 HK3P52790 923 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 IFI35P80217 286 aaPredicted RBP10.68□□□□□ -0.7
TUBE1-210ENST00000604967 WASHC5Q12768 1159 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 TARDBPQ13148 414 aaKnown RBP eCLIP10.68□□□□□ -0.7
TUBE1-210ENST00000604967 NFATC4Q14934 902 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 ACOX1Q15067 660 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 TSR1Q2NL82 804 aaKnown RBP10.68□□□□□ -0.7
TUBE1-210ENST00000604967 INAVAQ3KP66 663 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 HES3Q5TGS1 186 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 CDCP2Q5VXM1 449 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 LRRC66Q68CR7 880 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 DENND2CQ68D51 928 aa10.68□□□□□ -0.7
TUBE1-210ENST00000604967 ESRP1Q6NXG1 681 aaKnown RBP10.68□□□□□ -0.7
TUBE1-210ENST00000604967 AADACL2Q6P093 401 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms