RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 CLPBQ9H078 707 aa18.17■□□□□ 0.5
CCDC12-208ENST00000603885 NHEJ1Q9H9Q4 299 aaPredicted RBP18.17■□□□□ 0.5
CCDC12-208ENST00000603885 HAUS2Q9NVX0 235 aa18.17■□□□□ 0.5
CCDC12-208ENST00000603885 PHTF1Q9UMS5 762 aa18.17■□□□□ 0.5
CCDC12-208ENST00000603885 DOLKQ9UPQ8 538 aa18.17■□□□□ 0.5
CCDC12-208ENST00000603885 ITPR1Q14643 2758 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 CELSR3Q9NYQ7 3312 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 EME2A4GXA9 379 aaPredicted RBP18.16■□□□□ 0.5
CCDC12-208ENST00000603885 YY2O15391 372 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 PGLSO95336 258 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 CYP2A6P11509 494 aaPredicted RBP18.16■□□□□ 0.5
CCDC12-208ENST00000603885 KELP23276 732 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 KIAA1024LP59773 190 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 ITKQ08881 620 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 CNGA3Q16281 694 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 IFI16Q16666 785 aaKnown RBP18.16■□□□□ 0.5
CCDC12-208ENST00000603885 ARMC12Q5T9G4 340 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 CDCP2Q5VXM1 449 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 GUSBP11Q6P575 273 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 CNGA4Q8IV77 575 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 SDR16C5Q8N3Y7 309 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 SLC35G2Q8TBE7 412 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 SCG3Q8WXD2 468 aaKnown RBP18.16■□□□□ 0.5
CCDC12-208ENST00000603885 FAF2Q96CS3 445 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 COQ10AQ96MF6 247 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 DEPDC7Q96QD5 511 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 POLR1EQ9GZS1 481 aaKnown RBP18.16■□□□□ 0.5
CCDC12-208ENST00000603885 SPTLC3Q9NUV7 552 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 KCTD5Q9NXV2 234 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 GPSM3Q9Y4H4 160 aa18.16■□□□□ 0.5
CCDC12-208ENST00000603885 URB1O60287 2271 aaKnown RBP18.16■□□□□ 0.5
CCDC12-208ENST00000603885 MATN3O15232 486 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 HEXIM1O94992 359 aaKnown RBP18.15■□□□□ 0.5
CCDC12-208ENST00000603885 MAP3K6O95382 1288 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 CELA2BP08218 269 aaPredicted RBP18.15■□□□□ 0.5
CCDC12-208ENST00000603885 GM2AP17900 193 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 MX2P20592 715 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 CCNCP24863 283 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 ESRP1Q6NXG1 681 aaKnown RBP18.15■□□□□ 0.5
CCDC12-208ENST00000603885 LVRNQ6Q4G3 990 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 USP45Q70EL2 814 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 GKN2Q86XP6 184 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 RHOT2Q8IXI1 618 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 SLC35F3Q8IY50 421 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 NDUFAF2Q8N183 169 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 MAML1Q92585 1016 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 NAT6Q93015 286 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 FATE1Q969F0 183 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 FUBP1Q96AE4 644 aaKnown RBP18.15■□□□□ 0.5
CCDC12-208ENST00000603885 NUS1Q96E22 293 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 PDXPQ96GD0 296 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 TSGA13Q96PP4 275 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 SEMA3CQ99985 751 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 WDR26Q9H7D7 661 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 LHX6Q9UPM6 363 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 RAI2Q9Y5P3 530 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 DGKBQ9Y6T7 804 aa18.15■□□□□ 0.5
CCDC12-208ENST00000603885 LRP4O75096 1905 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 AKR1B15C9JRZ8 316 aaPredicted RBP18.14■□□□□ 0.49
CCDC12-208ENST00000603885 TNFP01375 233 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 HOXC4P09017 264 aaPredicted RBP18.14■□□□□ 0.49
CCDC12-208ENST00000603885 KRT10P13645 584 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 CES1P23141 567 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 KDELR1P24390 212 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 TRIM23P36406 574 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 ARHGAP25P42331 645 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 ARHGEF7Q14155 803 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 TCEA2Q15560 299 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 DENND2CQ68D51 928 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 PNCKQ6P2M8 343 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 PQLC3Q8N755 202 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 OR56A4Q8NGH8 313 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 TPCN2Q8NHX9 752 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 SCRN2Q96FV2 425 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 ZNF830Q96NB3 372 aaPredicted RBP18.14■□□□□ 0.49
CCDC12-208ENST00000603885 MCCC1Q96RQ3 725 aaPredicted RBP18.14■□□□□ 0.49
CCDC12-208ENST00000603885 ANP32EQ9BTT0 268 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 RBM22Q9NW64 420 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCDC12-208ENST00000603885 AMACRQ9UHK6 382 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 RALYQ9UKM9 306 aaKnown RBP18.14■□□□□ 0.49
CCDC12-208ENST00000603885 TTLL3Q9Y4R7 772 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 ASXL3Q9C0F0 2248 aa18.14■□□□□ 0.49
CCDC12-208ENST00000603885 NBEAQ8NFP9 2946 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 LRRD1A4D1F6 860 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 TMEM202A6NGA9 273 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 NPIPB15A6NHN6 443 aaPredicted RBP18.13■□□□□ 0.49
CCDC12-208ENST00000603885 PSMD11O00231 422 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 PDE2AO00408 941 aaPredicted RBP18.13■□□□□ 0.49
CCDC12-208ENST00000603885 TNFRSF10CO14798 259 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 CSO75390 466 aaKnown RBP18.13■□□□□ 0.49
CCDC12-208ENST00000603885 MTA2O94776 668 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 CCNB1P14635 433 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 LHCGRP22888 699 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 GBE1Q04446 702 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 ALG1LQ6GMV1 187 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 C19orf48Q6RUI8 117 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 NYAP1Q6ZVC0 841 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 ARL10Q8N8L6 244 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 OR1E3Q8WZA6 343 aa18.13■□□□□ 0.49
CCDC12-208ENST00000603885 RAPGEF5Q92565 580 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms