RNA–Protein interactions for RNA: ENST00000602265.5

TIMM50-219, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-219	ENST00000602265	ZNF677	Q86XU0	584 aa		13.45	□□□□□ -0.26
TIMM50-219	ENST00000602265	GPBAR1	Q8TDU6	330 aa		13.45	□□□□□ -0.26
TIMM50-219	ENST00000602265	JPH3	Q8WXH2	748 aa	Predicted RBP	13.45	□□□□□ -0.26
TIMM50-219	ENST00000602265	C11orf70	Q9BRQ4	267 aa		13.45	□□□□□ -0.26
TIMM50-219	ENST00000602265	LRRC19	Q9H756	370 aa		13.45	□□□□□ -0.26
TIMM50-219	ENST00000602265	ST14	Q9Y5Y6	855 aa		13.45	□□□□□ -0.26
TIMM50-219	ENST00000602265	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	TCRBV5S1A1T	A0A578	114 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265		J3KR12	359 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	CACNB4	O00305	520 aa	Predicted RBP	13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	FGF1	P05230	155 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	UNG	P13051	313 aa	Predicted RBP	13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	CD1C	P29017	333 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	EPHB2	P29323	1055 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	STAT1	P42224	750 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	CSNK1D	P48730	415 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	MAZ	P56270	477 aa	Known RBP	13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	FOXK1	P85037	733 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	CDR2	Q01850	454 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	ARHGEF7	Q14155	803 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	BORA	Q6PGQ7	559 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	WDR59	Q6PJI9	974 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	SLFN11	Q7Z7L1	901 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	PIM3	Q86V86	326 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	PTRH1	Q86Y79	214 aa	Known RBP	13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	RCBTB1	Q8NDN9	531 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	SLC30A5	Q8TAD4	765 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	TUBGCP5	Q96RT8	1024 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	TUBGCP2	Q9BSJ2	902 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	CDH19	Q9H159	772 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	DPEP2	Q9H4A9	486 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	CYP4F12	Q9HCS2	524 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	TUBD1	Q9UJT1	453 aa		13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	SPTBN1	Q01082	2364 aa	Known RBP	13.44	□□□□□ -0.26
TIMM50-219	ENST00000602265	PRAMEF11	O60813	436 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	CCNB1	P14635	433 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	LIF	P15018	202 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	KEL	P23276	732 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	UGT1A3	P35503	534 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	LIMK2	P53671	638 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	POLE2	P56282	527 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	KCNAB2	Q13303	367 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	SQSTM1	Q13501	440 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	SKIDA1	Q1XH10	827 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	MAP9	Q49MG5	647 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	TMEM164	Q5U3C3	297 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	DPPA4	Q7L190	304 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	ZNF354C	Q86Y25	554 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	MLKL	Q8NB16	471 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	PTCD2	Q8WV60	388 aa	Known RBP	13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	CCDC74B	Q96LY2	380 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	TAAR9	Q96RI9	348 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	PCDHB18P	Q96TA0	734 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	NCAPG	Q9BPX3	1015 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	SPRY4	Q9C004	299 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	GAN	Q9H2C0	597 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	UBA2	Q9UBT2	640 aa	Predicted RBP	13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	FZD10	Q9ULW2	581 aa		13.43	□□□□□ -0.26
TIMM50-219	ENST00000602265	ICE1	Q9Y2F5	2266 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	PRSS38	A1L453	326 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	TRAFD1	O14545	582 aa	Predicted RBP	13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	CCP110	O43303	1012 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	CEACAM5	P06731	702 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	KRT3	P12035	628 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	GP1BB	P13224	206 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	PRKCSH	P14314	528 aa	Predicted RBP	13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	CR2	P20023	1033 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	GPD1	P21695	349 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	CASR	P41180	1078 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	JAM2	P57087	298 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	AMZ1	Q400G9	498 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	PNCK	Q6P2M8	343 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	SRL	Q86TD4	932 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	CBARP	Q8N350	705 aa	Predicted RBP	13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	TSEN2	Q8NCE0	465 aa	Known RBP	13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	KIAA1524	Q8TCG1	905 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	PATE1	Q8WXA2	126 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	SPOCK2	Q92563	424 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	COQ10A	Q96MF6	247 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	DDA1	Q9BW61	102 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	B3GALT1	Q9Y5Z6	326 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	UNC79	Q9P2D8	2635 aa		13.42	□□□□□ -0.26
TIMM50-219	ENST00000602265	PPM1D	O15297	605 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	GFPT2	O94808	682 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	ECEL1	O95672	775 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	NTRK1	P04629	796 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	ELFN1	P0C7U0	828 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	THRA	P10827	490 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	MYCLP1	P12525	358 aa	Predicted RBP	13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	SERPINA4	P29622	427 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	CSF2RB	P32927	897 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	GPR3	P46089	330 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	ATP1A2	P50993	1020 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	NDST2	P52849	883 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	IGFBP7	Q16270	282 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	CAMK4	Q16566	473 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	TSR1	Q2NL82	804 aa	Known RBP	13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	HSP90AA4P	Q58FG1	418 aa		13.41	□□□□□ -0.26
TIMM50-219	ENST00000602265	PPP1R15B	Q5SWA1	713 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms