RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 PDCD6IPQ8WUM4 868 aaKnown RBP9.22□□□□□ -0.93
FARP1-232ENST00000601009 NUS1Q96E22 293 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 TMEM74Q96NL1 305 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 NAP1L5Q96NT1 182 aaPredicted RBP9.22□□□□□ -0.93
FARP1-232ENST00000601009 CSPG4P5Q96PW8 444 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 GFM1Q96RP9 751 aaKnown RBP9.22□□□□□ -0.93
FARP1-232ENST00000601009 NUDCD1Q96RS6 583 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 RBM15Q96T37 977 aaKnown RBP eCLIP9.22□□□□□ -0.93
FARP1-232ENST00000601009 TRIM7Q9C029 511 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 CLPBQ9H078 707 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 PRORYQ9H606 182 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 PHPT1Q9NRX4 125 aaPredicted RBP9.22□□□□□ -0.93
FARP1-232ENST00000601009 SIRPGQ9P1W8 387 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 ANAPC7Q9UJX3 599 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 PHTF1Q9UMS5 762 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 SATB2Q9UPW6 733 aa9.22□□□□□ -0.93
FARP1-232ENST00000601009 SHROOM3Q8TF72 1996 aa9.21□□□□□ -0.93
FARP1-232ENST00000601009 CAPN8A6NHC0 703 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 PSMD11O00231 422 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 TRAFD1O14545 582 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 HTRA2O43464 458 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 HOXB3P14651 431 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 CA4P22748 312 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 CES1P23141 567 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 VIPR1P32241 457 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 SSR1P43307 286 aaKnown RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 MMP13P45452 471 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 CXADRP78310 365 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 FANCCQ00597 558 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 SLC10A7Q0GE19 358 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 RALGDSQ12967 914 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 IQCB1Q15051 598 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 NFKBIBQ15653 356 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 PERM1Q5SV97 790 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 MARC1Q5VT66 337 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 E4F1Q66K89 784 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 TIGD7Q6NT04 549 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 CRTC1Q6UUV9 634 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 ARHGAP36Q6ZRI8 547 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 CYP4V2Q6ZWL3 525 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 TAF8Q7Z7C8 310 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 ZSWIM9Q86XI8 627 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 MAP7D3Q8IWC1 876 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 KYQ8NBH2 561 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 FUBP1Q96AE4 644 aaKnown RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 PDXPQ96GD0 296 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 ATXN7L3BQ96GX2 97 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 LIN37Q96GY3 246 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 HIC2Q96JB3 615 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 SLC46A1Q96NT5 459 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 MGME1Q9BQP7 344 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 ANP32EQ9BTT0 268 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 NUP85Q9BW27 656 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 B4GALT6Q9UBX8 382 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 DNPEPQ9ULA0 475 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 PNMA8BQ9ULN7 279 aaPredicted RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 LUC7L2Q9Y383 392 aaKnown RBP9.21□□□□□ -0.94
FARP1-232ENST00000601009 ENTPD2Q9Y5L3 495 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 LRP4O75096 1905 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 MGAQ8IWI9 3026 aa9.21□□□□□ -0.94
FARP1-232ENST00000601009 GOLGA6CA6NDK9 693 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 GOLGA6BA6NDN3 693 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 D6RAR5 112 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 NTN3O00634 580 aaPredicted RBP9.2□□□□□ -0.94
FARP1-232ENST00000601009 ATXN7O15265 892 aaPredicted RBP9.2□□□□□ -0.94
FARP1-232ENST00000601009 KLK10O43240 276 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 MAFKO60675 156 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 PRKCGP05129 697 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 CYP1A2P05177 515 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 PYGLP06737 847 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 ITGA2BP08514 1039 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 GOLGA6DP0CG33 693 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 RARAP10276 462 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 MYCLP1P12525 358 aaPredicted RBP9.2□□□□□ -0.94
FARP1-232ENST00000601009 PNLIPP16233 465 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 GLB1P16278 677 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 AMPD1P23109 780 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 IL1R2P27930 398 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 TRIM23P36406 574 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 INHBCP55103 352 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 RHDQ02161 417 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 ITKQ08881 620 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 ILF3Q12906 894 aaKnown RBP eCLIP9.2□□□□□ -0.946e-7■■■■□ 21.6
FARP1-232ENST00000601009 BIRC2Q13490 618 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 CCDC122Q5T0U0 273 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 ARMC12Q5T9G4 340 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 HGSNATQ68CP4 663 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 PNCKQ6P2M8 343 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 ALKBH5Q6P6C2 394 aaKnown RBP9.2□□□□□ -0.94
FARP1-232ENST00000601009 FOXR1Q6PIV2 292 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 PLA2G15Q8NCC3 412 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 FAM46DQ8NEK8 389 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 ZNF564Q8TBZ8 553 aaPredicted RBP9.2□□□□□ -0.94
FARP1-232ENST00000601009 CCDC74AQ96AQ1 378 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 TMEM159Q96B96 161 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 CRELD1Q96HD1 420 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 NAF1Q96HR8 494 aaKnown RBP9.2□□□□□ -0.94
FARP1-232ENST00000601009 GSDMCQ9BYG8 508 aa9.2□□□□□ -0.94
FARP1-232ENST00000601009 POLR1EQ9GZS1 481 aaKnown RBP9.2□□□□□ -0.94
FARP1-232ENST00000601009 THAP2Q9H0W7 228 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms