RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TRIB3Q96RU7 358 aa15.8■□□□□ 0.12
RPS28-203ENST00000600659 OSBPL8Q9BZF1 889 aa15.8■□□□□ 0.12
RPS28-203ENST00000600659 SLC32A1Q9H598 525 aa15.8■□□□□ 0.12
RPS28-203ENST00000600659 WDFY3Q8IZQ1 3526 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 A0A0J9YYE9 177 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 YKT6O15498 198 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 SDC3O75056 442 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 TRBC1P01850 177 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 CTPS1P17812 591 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 CD86P42081 329 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 GRK6P43250 576 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 ARRB1P49407 418 aaPredicted RBP15.79■□□□□ 0.12
RPS28-203ENST00000600659 OTUD4Q01804 1114 aaKnown RBP15.79■□□□□ 0.12
RPS28-203ENST00000600659 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
RPS28-203ENST00000600659 PDE1CQ14123 709 aaPredicted RBP15.79■□□□□ 0.12
RPS28-203ENST00000600659 LRRC14Q15048 493 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 CDKN3Q16667 212 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 KCTD16Q68DU8 428 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 ZNF662Q6ZS27 426 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 PEX26Q7Z412 305 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 HSD11B1LQ7Z5J1 315 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 ZC3H18Q86VM9 953 aaKnown RBP15.79■□□□□ 0.12
RPS28-203ENST00000600659 TXLNBQ8N3L3 684 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 RNF10Q8N5U6 811 aaKnown RBP15.79■□□□□ 0.12
RPS28-203ENST00000600659 TFB1MQ8WVM0 346 aaKnown RBP15.79■□□□□ 0.12
RPS28-203ENST00000600659 P3H4Q92791 437 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 IFT43Q96FT9 208 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 AGAP3Q96P47 875 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 C10orf88Q9H8K7 445 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 UCKL1Q9NWZ5 548 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 AMFRQ9UKV5 643 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 PLXNB3Q9ULL4 1909 aa15.79■□□□□ 0.12
RPS28-203ENST00000600659 CAPN8A6NHC0 703 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 MIF4GDA9UHW6 222 aaKnown RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 PIAS2O75928 621 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 DKK1O94907 266 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 C1SP09871 688 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 NME1P15531 152 aaKnown RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 HNF1BP35680 557 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 YPEL5P62699 121 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 SIM1P81133 766 aaPredicted RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 FOXK2Q01167 660 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 KLF1Q13351 362 aaPredicted RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 TRIP6Q15654 476 aaKnown RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 QPCTQ16769 361 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 ZNF542PQ5EBM4 170 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 CRTC1Q6UUV9 634 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 RFLNAQ6ZTI6 216 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 BZW1Q7L1Q6 419 aaKnown RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 PARGQ86W56 976 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 DCP2Q8IU60 420 aaKnown RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 SYCE1Q8N0S2 351 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 SLC25A45Q8N413 288 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 SPATA22Q8NHS9 363 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 ACTL9Q8TC94 416 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 RHBDD1Q8TEB9 315 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 SETD7Q8WTS6 366 aaKnown RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 DTD2Q96FN9 168 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 LYSMD1Q96S90 227 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 RBM15Q96T37 977 aaKnown RBP eCLIP15.78■□□□□ 0.12
RPS28-203ENST00000600659 GORASP1Q9BQQ3 440 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 SLC25A51Q9H1U9 297 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 TCEAL2Q9H3H9 227 aaPredicted RBP15.78■□□□□ 0.12
RPS28-203ENST00000600659 GLOD4Q9HC38 313 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 PCDH9Q9HC56 1237 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 SEPT10Q9P0V9 454 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 GUCA1BQ9UMX6 200 aa15.78■□□□□ 0.12
RPS28-203ENST00000600659 K7ESM1 405 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 PSMD11O00231 422 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 LZTS3O60299 673 aaPredicted RBP15.77■□□□□ 0.12
RPS28-203ENST00000600659 TOP3BO95985 862 aaKnown RBP15.77■□□□□ 0.12
RPS28-203ENST00000600659 MT-CYBP00156 380 aaPredicted RBP15.77■□□□□ 0.12
RPS28-203ENST00000600659 SOD1P00441 154 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 CSF2P04141 144 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 PCCBP05166 539 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 DGKAP23743 735 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 XRCC4Q13426 336 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 MTM1Q13496 603 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 INPP5AQ14642 412 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 SUZ12Q15022 739 aaKnown RBP15.77■□□□□ 0.12
RPS28-203ENST00000600659 SLC14A2Q15849 920 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 LRRC66Q68CR7 880 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 ESRP1Q6NXG1 681 aaKnown RBP15.77■□□□□ 0.12
RPS28-203ENST00000600659 MACC1Q6ZN28 852 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 USP45Q70EL2 814 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 TECPR1Q7Z6L1 1165 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 SLCO6A1Q86UG4 719 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 ZNF567Q8N184 647 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 LPCAT1Q8NF37 534 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 FAM118BQ9BPY3 351 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 C1QTNF7Q9BXJ2 289 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 TSGA10Q9BZW7 698 aa15.77■□□□□ 0.12
RPS28-203ENST00000600659 MYLKQ15746 1914 aa15.77■□□□□ 0.11
RPS28-203ENST00000600659 ARHGEF17Q96PE2 2063 aaPredicted RBP15.76■□□□□ 0.11
RPS28-203ENST00000600659 COL27A1Q8IZC6 1860 aaPredicted RBP15.76■□□□□ 0.11
RPS28-203ENST00000600659 TCRBV7S2A1N4TA0A589 114 aa15.76■□□□□ 0.11
RPS28-203ENST00000600659 GOLGA6L3A6NEY3 463 aa15.76■□□□□ 0.11
RPS28-203ENST00000600659 HACD1B0YJ81 288 aa15.76■□□□□ 0.11
RPS28-203ENST00000600659 TRIM38O00635 465 aa15.76■□□□□ 0.11
RPS28-203ENST00000600659 TOR1BO14657 336 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms