RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	BBS5	Q8N3I7	341 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	SPC24	Q8NBT2	197 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	KIAA1524	Q8TCG1	905 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	CXorf40A	Q8TE69	158 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	LRRN4	Q8WUT4	740 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	ADAMTS14	Q8WXS8	1223 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	IMP4	Q96G21	291 aa	Known RBP	8.82	□□□□□ -1
SSBP4-208	ENST00000600628	HES6	Q96HZ4	224 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	RBM41	Q96IZ5	413 aa	Known RBP	8.82	□□□□□ -1
SSBP4-208	ENST00000600628	TEKT5	Q96M29	485 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	CDC6	Q99741	560 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	DESI2	Q9BSY9	194 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	WRAP53	Q9BUR4	548 aa	Known RBP	8.82	□□□□□ -1
SSBP4-208	ENST00000600628	CAAP1	Q9H8G2	361 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	SCUBE2	Q9NQ36	999 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	RBM22	Q9NW64	420 aa	Known RBP eCLIP	8.82	□□□□□ -1
SSBP4-208	ENST00000600628	SAE1	Q9UBE0	346 aa	Predicted RBP	8.82	□□□□□ -1
SSBP4-208	ENST00000600628	B4GALT6	Q9UBX8	382 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	TRIM10	Q9UDY6	481 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	HEY1	Q9Y5J3	304 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	RAI2	Q9Y5P3	530 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628		U3KQA8	63 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	MYLK	Q15746	1914 aa		8.82	□□□□□ -1
SSBP4-208	ENST00000600628	ZNF106	Q9H2Y7	1883 aa	Known RBP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	ANKRD66	B4E2M5	251 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	FPGT	O14772	594 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PPP1R12A	O14974	1030 aa	Predicted RBP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PIAS2	O75928	621 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	RECQL5	O94762	991 aa	Predicted RBP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	IPO7	O95373	1038 aa	Known RBP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	SOD1	P00441	154 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	CP	P00450	1065 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PYGM	P11217	842 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PTPN3	P26045	913 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	VIPR1	P32241	457 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PTS	Q03393	145 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	SGCG	Q13326	291 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	LRRC14	Q15048	493 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	NOMO1	Q15155	1222 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PTPRR	Q15256	657 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	IRF4	Q15306	451 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PROX2	Q3B8N5	592 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	ARMC12	Q5T9G4	340 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	ERAP2	Q6P179	960 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	MACC1	Q6ZN28	852 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	BZW1	Q7L1Q6	419 aa	Known RBP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	ZNF765	Q7L2R6	523 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PARG	Q86W56	976 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	LRRC8A	Q8IWT6	810 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	FAM181A	Q8N9Y4	354 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	PLA2G15	Q8NCC3	412 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	NSMCE1	Q8WV22	266 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	EID2B	Q96D98	161 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	DTD2	Q96FN9	168 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	QKI	Q96PU8	341 aa	Known RBP eCLIP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	WDR24	Q96S15	920 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	MYOC	Q99972	504 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	GORASP1	Q9BQQ3	440 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	SCNM1	Q9BWG6	230 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	SLC25A51	Q9H1U9	297 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	USP29	Q9HBJ7	922 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	UCKL1	Q9NWZ5	548 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	KCTD5	Q9NXV2	234 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	COQ6	Q9Y2Z9	468 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	8.81	□□□□□ -1
SSBP4-208	ENST00000600628	CSNK1G3	Q9Y6M4	447 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	CAPN6	Q9Y6Q1	641 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	DGKB	Q9Y6T7	804 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	LOC400499	M0QZD8	3231 aa		8.81	□□□□□ -1
SSBP4-208	ENST00000600628	APC2	O95996	2303 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	LOC285095	A0A1B0GVY8	99 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	CAPN8	A6NHC0	703 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	MIF4GD	A9UHW6	222 aa	Known RBP	8.8	□□□□□ -1
SSBP4-208	ENST00000600628	HACD1	B0YJ81	288 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	TRIM38	O00635	465 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	NEMP1	O14524	444 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	TNFRSF10C	O14798	259 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	SCAMP1	O15126	338 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	TNFSF14	O43557	240 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	HYAL3	O43820	417 aa	Predicted RBP	8.8	□□□□□ -1
SSBP4-208	ENST00000600628	LZTS3	O60299	673 aa	Predicted RBP	8.8	□□□□□ -1
SSBP4-208	ENST00000600628	FUCA1	P04066	466 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	PRKCG	P05129	697 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	ITGAV	P06756	1048 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	ATXN1L	P0C7T5	689 aa	Known RBP	8.8	□□□□□ -1
SSBP4-208	ENST00000600628	ELFN1	P0C7U0	828 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	FTH1P19	P0C7X4	201 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	ZNF30	P17039	623 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	SPINK2	P20155	84 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	HNF1B	P35680	557 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	STC1	P52823	247 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	RWDD2B	P57060	319 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	KIAA1024L	P59773	190 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	HNRNPK	P61978	463 aa	Known RBP eCLIP	8.8	□□□□□ -1
SSBP4-208	ENST00000600628	SEMG2	Q02383	582 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	KIF5A	Q12840	1032 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	ZNF211	Q13398	564 aa	Predicted RBP	8.8	□□□□□ -1
SSBP4-208	ENST00000600628	INPP5A	Q14642	412 aa		8.8	□□□□□ -1
SSBP4-208	ENST00000600628	FAM182A	Q5T1J6	154 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms