RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 IRF4Q15306 451 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 OASLQ15646 514 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 CRTC1Q6UUV9 634 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 RFLNAQ6ZTI6 216 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 KANSL1Q7Z3B3 1105 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 HSD11B1LQ7Z5J1 315 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 PIP4P1Q86T03 277 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 CDKL3Q8IVW4 592 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 ATG4AQ8WYN0 398 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 ANP32BQ92688 251 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 TRMT1Q9NXH9 659 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 DNPEPQ9ULA0 475 aa19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 RPL26L1Q9UNX3 145 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-221ENST00000599833 SPTBN2O15020 2390 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 A0A1B0GTQ1 180 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 LOC285095A0A1B0GVY8 99 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 RECQL5O94762 991 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 ATXN1LP0C7T5 689 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 THEGLP0DJG4 465 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 GDF10P55107 478 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 PTSQ03393 145 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 SGCGQ13326 291 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 PRAMEF14Q5SWL7 426 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 SEL1L2Q5TEA6 688 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 CCDC181Q5TID7 509 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 IL27RAQ6UWB1 636 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 Q6ZSR6 202 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 TECPR1Q7Z6L1 1165 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 TTC13Q8NBP0 860 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 PLA2G15Q8NCC3 412 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 EID2BQ96D98 161 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 RTP4Q96DX8 246 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 MRGPRX2Q96LB1 330 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 MLPHQ9BV36 600 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 ERVMER34-1Q9H9K5 563 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 HAUS2Q9NVX0 235 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 UBP1Q9NZI7 540 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 KLHL8Q9P2G9 620 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 TRHDEQ9UKU6 1024 aa19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 CDV3Q9UKY7 258 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-221ENST00000599833 A6NNZ2 444 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ANKRD66B4E2M5 251 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ENC1O14682 589 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 KCNN4O15554 427 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 NEBLO76041 1014 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 CER1O95813 267 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 C1SP09871 688 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ELFN1P0C7U0 828 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 RXRGP48443 463 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 CCDC173Q0VFZ6 552 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ANKRD20A2Q5SQ80 823 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ANKRD20A1Q5TYW2 823 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ANKRD20A3Q5VUR7 823 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 NYAP1Q6ZVC0 841 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 PID1Q7Z2X4 250 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ADAT2Q7Z6V5 191 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 SLC35F6Q8N357 371 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 LPCAT1Q8NF37 534 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 KLHDC7BQ96G42 594 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 ELF4Q99607 663 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 RTKNQ9BST9 563 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 GBA3Q9H227 469 aa19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 TDRD6O60522 2096 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-221ENST00000599833 C5orf60A6NFR6 353 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 F5H423 210 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 PSMD11O00231 422 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 FANCGO15287 622 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 ZSCAN12O43309 604 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 LIASO43766 372 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 CXCR5P32302 372 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 C21orf59P57076 290 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 CDK18Q07002 472 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 FZD2Q14332 565 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 GALNT3Q14435 633 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 LRRC66Q68CR7 880 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 DARS2Q6PI48 645 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 USP45Q70EL2 814 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 RASGEF1CQ8N431 466 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 FAM174AQ8TBP5 190 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 CCDC110Q8TBZ0 833 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 DTD2Q96FN9 168 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 SPATA13Q96N96 652 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 WDR24Q96S15 920 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 GDF3Q9NR23 364 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 TM7SF3Q9NS93 570 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 JRKLQ9Y4A0 524 aa19.53■□□□□ 0.72
SHKBP1-221ENST00000599833 GOLGA6L9A6NEM1 432 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 K7ESM1 405 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 FPGTO14772 594 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 OPHN1O60890 802 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 PMPCBO75439 489 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 SOD1P00441 154 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 ATP1A1P05023 1023 aaKnown RBP19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 CYP2A6P11509 494 aaPredicted RBP19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 PSMB4P28070 264 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 ADRA1AP35348 466 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 ETV3P41162 512 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 RABIFP47224 123 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 ID4P47928 161 aa19.52■□□□□ 0.72
SHKBP1-221ENST00000599833 STC1P52823 247 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms