RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 CFAP69A5D8W1 941 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 H3BRJ5 948 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 CYP1A2P05177 515 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 PCK1P35558 622 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 ARL4AP40617 200 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 SRP54P61011 504 aaKnown RBP18.82■□□□□ 0.6
PNKP-213ENST00000599543 AP1S1P61966 158 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 SPIDRQ14159 915 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 ZNF235Q14590 738 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 LBRQ14739 615 aaKnown RBP18.82■□□□□ 0.6
PNKP-213ENST00000599543 SMTNL2Q2TAL5 461 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 LVRNQ6Q4G3 990 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 GKN2Q86XP6 184 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 SDR16C5Q8N3Y7 309 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 HIC2Q96JB3 615 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 WDR92Q96MX6 357 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 PSKH2Q96QS6 385 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 ENTPD2Q9Y5L3 495 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 ATMQ13315 3056 aa18.82■□□□□ 0.6
PNKP-213ENST00000599543 SOWAHDA6NJG2 315 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 CACNB4O00305 520 aaPredicted RBP18.81■□□□□ 0.6
PNKP-213ENST00000599543 RECQL5O94762 991 aaPredicted RBP18.81■□□□□ 0.6
PNKP-213ENST00000599543 H2AFZP0C0S5 128 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 TCF4P15884 667 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 RBMS1P29558 406 aaKnown RBP18.81■□□□□ 0.6
PNKP-213ENST00000599543 RALGDSQ12967 914 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 DPYSL2Q16555 572 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 BROXQ5VW32 411 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 H2AFVQ71UI9 128 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 DPPA4Q7L190 304 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 GPR155Q7Z3F1 870 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 KYQ8NBH2 561 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 HSPH1Q92598 858 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 PDXPQ96GD0 296 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 ZNF599Q96NL3 588 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 ASCL3Q9NQ33 180 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.81■□□□□ 0.6
PNKP-213ENST00000599543 ANAPC7Q9UJX3 599 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 TFR2Q9UP52 801 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 GPR34Q9UPC5 381 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 UNC13CQ8NB66 2214 aa18.81■□□□□ 0.6
PNKP-213ENST00000599543 ARHGEF17Q96PE2 2063 aaPredicted RBP18.8■□□□□ 0.6
PNKP-213ENST00000599543 TRAFD1O14545 582 aaPredicted RBP18.8■□□□□ 0.6
PNKP-213ENST00000599543 TNFP01375 233 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 KELP23276 732 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 IL1R2P27930 398 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 CDC25BP30305 580 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 KIAA1024LP59773 190 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 CXADRP78310 365 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 SLC10A7Q0GE19 358 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 IGF2-ASQ6U949 168 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 TMCO3Q6UWJ1 677 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 LIPIQ6XZB0 460 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 TP53INP2Q8IXH6 220 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 PLA2G15Q8NCC3 412 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 KCNE4Q8WWG9 221 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 CTTNBP2NLQ9P2B4 639 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 DGKBQ9Y6T7 804 aa18.8■□□□□ 0.6
PNKP-213ENST00000599543 TEX51A0A1B0GUA7 166 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.79■□□□□ 0.6
PNKP-213ENST00000599543 A8MX80 341 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 HSPA9P38646 679 aaKnown RBP18.79■□□□□ 0.6
PNKP-213ENST00000599543 TMPRSS3P57727 454 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 PIGHQ14442 188 aaPredicted RBP18.79■□□□□ 0.6
PNKP-213ENST00000599543 ACOX1Q15067 660 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 BOLA3Q53S33 107 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 FOXR1Q6PIV2 292 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 NYAP1Q6ZVC0 841 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 POLNQ7Z5Q5 900 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 BBS5Q8N3I7 341 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 ATPAF2Q8N5M1 289 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 OR56A4Q8NGH8 313 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 ZNF564Q8TBZ8 553 aaPredicted RBP18.79■□□□□ 0.6
PNKP-213ENST00000599543 PDCD6IPQ8WUM4 868 aaKnown RBP18.79■□□□□ 0.6
PNKP-213ENST00000599543 CTNNBL1Q8WYA6 563 aaPredicted RBP18.79■□□□□ 0.6
PNKP-213ENST00000599543 FUBP1Q96AE4 644 aaKnown RBP18.79■□□□□ 0.6
PNKP-213ENST00000599543 CCDC74AQ96AQ1 378 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 RBM15Q96T37 977 aaKnown RBP eCLIP18.79■□□□□ 0.67e-9■■■□□ 16.1
PNKP-213ENST00000599543 WDR26Q9H7D7 661 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 PCDHGA8Q9Y5G5 932 aa18.79■□□□□ 0.6
PNKP-213ENST00000599543 A0A1W2PNU3 283 aaPredicted RBP18.78■□□□□ 0.6
PNKP-213ENST00000599543 ATXN7O15265 892 aaPredicted RBP18.78■□□□□ 0.6
PNKP-213ENST00000599543 SOCS5O75159 536 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 AMPD1P23109 780 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 NFKBIAP25963 317 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 PDX1P52945 283 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 UCNP55089 124 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 ARL14Q8N4G2 192 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 OR6C4Q8NGE1 309 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 WDR36Q8NI36 951 aaKnown RBP18.78■□□□□ 0.6
PNKP-213ENST00000599543 NSMCE1Q8WV22 266 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 SLC46A1Q96NT5 459 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 CSPG4P5Q96PW8 444 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 PANX2Q96RD6 677 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 B4GALT6Q9UBX8 382 aa18.78■□□□□ 0.6
PNKP-213ENST00000599543 A0A1W2PQ67 120 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 TTC24A2A3L6 582 aaPredicted RBP18.77■□□□□ 0.6
PNKP-213ENST00000599543 TMEM202A6NGA9 273 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 TK2O00142 265 aa18.77■□□□□ 0.6
PNKP-213ENST00000599543 NTN3O00634 580 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms