RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 PDCD6IPQ8WUM4 868 aaKnown RBP22.97■■□□□ 1.27
CCDC61-207ENST00000599044 GLMNQ92990 594 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 NAF1Q96HR8 494 aaKnown RBP22.97■■□□□ 1.27
CCDC61-207ENST00000599044 HIC2Q96JB3 615 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 NUDCD1Q96RS6 583 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 POLR1BQ9H9Y6 1135 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 IP6K2Q9UHH9 426 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 NENFQ9UMX5 172 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 DOLKQ9UPQ8 538 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 SATB2Q9UPW6 733 aa22.97■■□□□ 1.27
CCDC61-207ENST00000599044 ANKRD36A6QL64 1941 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 ARSEP51690 589 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 PDX1P52945 283 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 TRAF2Q12933 501 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 ACOX1Q15067 660 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 CCDC122Q5T0U0 273 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 ESRP1Q6NXG1 681 aaKnown RBP22.96■■□□□ 1.27
CCDC61-207ENST00000599044 ALKBH5Q6P6C2 394 aaKnown RBP22.96■■□□□ 1.27
CCDC61-207ENST00000599044 SPACA3Q8IXA5 215 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 PRR11Q96HE9 360 aaPredicted RBP22.96■■□□□ 1.27
CCDC61-207ENST00000599044 COQ10AQ96MF6 247 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 RBM15Q96T37 977 aaKnown RBP eCLIP22.96■■□□□ 1.27
CCDC61-207ENST00000599044 MGME1Q9BQP7 344 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 XPO4Q9C0E2 1151 aaKnown RBP22.96■■□□□ 1.27
CCDC61-207ENST00000599044 ASCL3Q9NQ33 180 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 GPR34Q9UPC5 381 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 LUC7L2Q9Y383 392 aaKnown RBP22.96■■□□□ 1.27
CCDC61-207ENST00000599044 LRP4O75096 1905 aa22.96■■□□□ 1.27
CCDC61-207ENST00000599044 A0A0U1RQS6 177 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.95■■□□□ 1.26
CCDC61-207ENST00000599044 DXOO77932 396 aaKnown RBP22.95■■□□□ 1.26
CCDC61-207ENST00000599044 TNFP01375 233 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 ALPIP09923 528 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 CASP14P31944 242 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 TRIM23P36406 574 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 CDH6P55285 790 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 RP1P56715 2156 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 TLE3Q04726 772 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 CNGA3Q16281 694 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 C3orf38Q5JPI3 329 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 PNCKQ6P2M8 343 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 LVRNQ6Q4G3 990 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 RBM44Q6ZP01 1051 aaKnown RBP22.95■■□□□ 1.26
CCDC61-207ENST00000599044 CBARPQ8N350 705 aaPredicted RBP22.95■■□□□ 1.26
CCDC61-207ENST00000599044 ATPAF2Q8N5M1 289 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 ARL10Q8N8L6 244 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 OR56A4Q8NGH8 313 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 TPCN2Q8NHX9 752 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 FAM71BQ8TC56 605 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 SPOCK2Q92563 424 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 NAT6Q93015 286 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 ZNF578Q96N58 590 aaPredicted RBP22.95■■□□□ 1.26
CCDC61-207ENST00000599044 SMIM14Q96QK8 99 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 DGKBQ9Y6T7 804 aa22.95■■□□□ 1.26
CCDC61-207ENST00000599044 MGAQ8IWI9 3026 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 LHCGRP22888 699 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 SSR1P43307 286 aaKnown RBP22.94■■□□□ 1.26
CCDC61-207ENST00000599044 KIAA1024LP59773 190 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 KRT81Q14533 505 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 IHHQ14623 411 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 DENND2CQ68D51 928 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 HSD11B1LQ7Z5J1 315 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 CCL4L1Q8NHW4 92 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 CCDC74AQ96AQ1 378 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 TMEM168Q9H0V1 697 aa22.94■■□□□ 1.26
CCDC61-207ENST00000599044 CFAP46Q8IYW2 2715 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 MYO1FO00160 1098 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 CACNB4O00305 520 aaPredicted RBP22.93■■□□□ 1.26
CCDC61-207ENST00000599044 NTN3O00634 580 aaPredicted RBP22.93■■□□□ 1.26
CCDC61-207ENST00000599044 SOCS5O75159 536 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 HEXIM1O94992 359 aaKnown RBP22.93■■□□□ 1.26
CCDC61-207ENST00000599044 MAP3K6O95382 1288 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 CPP00450 1065 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 FUCA1P04066 466 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 MMP13P45452 471 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 MARC1Q5VT66 337 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 TSPAN33Q86UF1 283 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 GKN2Q86XP6 184 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 LRRN4Q8WUT4 740 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 SCG3Q8WXD2 468 aaKnown RBP22.93■■□□□ 1.26
CCDC61-207ENST00000599044 PACSIN1Q9BY11 444 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 SYNDIG1Q9H7V2 258 aa22.93■■□□□ 1.26
CCDC61-207ENST00000599044 NPIPB15A6NHN6 443 aaPredicted RBP22.92■■□□□ 1.26
CCDC61-207ENST00000599044 MFSD11O43934 449 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 TCEA3O75764 348 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 PDHA1P08559 390 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 HOXC4P09017 264 aaPredicted RBP22.92■■□□□ 1.26
CCDC61-207ENST00000599044 CTPS1P17812 591 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 VIPR1P32241 457 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 GJC1P36383 396 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 HSPA9P38646 679 aaKnown RBP22.92■■□□□ 1.26
CCDC61-207ENST00000599044 ETV3P41162 512 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 TAS2R40P59535 323 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 CCL7P80098 99 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 DPYSL3Q14195 570 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 KIF26BQ2KJY2 2108 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 SARM1Q6SZW1 724 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 RFLNAQ6ZTI6 216 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 B3GNT8Q7Z7M8 397 aa22.92■■□□□ 1.26
CCDC61-207ENST00000599044 LSMEM2Q8N112 164 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms