RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 EFSO43281 561 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 DAPK3O43293 454 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 LRCH4O75427 683 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 MBD3O95983 291 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 HTR7P34969 479 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 CSNK1DP48730 415 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 SCNN1BP51168 640 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 KIAA1024LP59773 190 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 BCL2L1Q07817 233 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 SLC10A7Q0GE19 358 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 SMTNL2Q2TAL5 461 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 LVRNQ6Q4G3 990 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCDC81Q6ZN84 652 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 TAF8Q7Z7C8 310 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 PGBD5Q8N414 524 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 OR56A4Q8NGH8 313 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 PTCD2Q8WV60 388 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 SCG3Q8WXD2 468 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 CYP4F12Q9HCS2 524 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 PARVAQ9NVD7 372 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 ETNK2Q9NVF9 386 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 CWC15Q9P013 229 aaKnown RBP12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 B4GALT6Q9UBX8 382 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 PISDQ9UG56 409 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 DGKBQ9Y6T7 804 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 BOD1L1Q8NFC6 3051 aa12.14□□□□□ -0.47
SOX2-OT-228ENST00000597828 MYO18BQ8IUG5 2567 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 A0A0U1RQS6 177 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 PRSS38A1L453 326 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 TMEM191CA6NGB0 347 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 LRRC10BA6NIK2 292 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 CACNB4O00305 520 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 DESP17661 470 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 IL1R2P27930 398 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCKBRP32239 447 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 MAZP56270 477 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 IL10RBQ08334 325 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 DPYSQ14117 519 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 ACOX1Q15067 660 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 CNGA3Q16281 694 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 ASIC2Q16515 512 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 C14orf28Q4W4Y0 310 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 CERCAMQ5T4B2 595 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 DENND2CQ68D51 928 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 SPECC1LQ69YQ0 1117 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 SPRED1Q7Z699 444 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 FAM46DQ8NEK8 389 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 PDCD6IPQ8WUM4 868 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 ZNF653Q96CK0 615 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCDC97Q96F63 343 aaPredicted RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 HAUS4Q9H6D7 363 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 LOXL2Q9Y4K0 774 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 PCDHGC4Q9Y5F7 938 aa12.13□□□□□ -0.47
SOX2-OT-228ENST00000597828 PRAMEF33A0A0G2JMD5 474 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 DDX3XO00571 662 aaKnown RBP eCLIP12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 PRPSAP2O60256 369 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 PRAMEF10O60809 474 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 FUCA1P04066 466 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 JMJD7P0C870 316 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 LHCGRP22888 699 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 AMPD1P23109 780 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 AK4P27144 223 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 MLLT3P42568 568 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 MAXP61244 160 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 TYRO3Q06418 890 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 TRAF2Q12933 501 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 HLTFQ14527 1009 aaKnown RBP eCLIP12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 TXNRD3NBQ6F5E7 133 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 PNCKQ6P2M8 343 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 VASH2Q86V25 355 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 PATE1Q8WXA2 126 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 NUS1Q96E22 293 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 COQ10AQ96MF6 247 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 SMIM14Q96QK8 99 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 PSKH2Q96QS6 385 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCNL2Q96S94 520 aaPredicted RBP12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 STRADBQ9C0K7 418 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 SEMA6CQ9H3T2 930 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 DPEP2Q9H4A9 486 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 WDR26Q9H7D7 661 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 SPATS2LQ9NUQ6 558 aaKnown RBP12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 LRIT1Q9P2V4 623 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 ST14Q9Y5Y6 855 aa12.12□□□□□ -0.47
SOX2-OT-228ENST00000597828 CFAP69A5D8W1 941 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 EIF3CLB5ME19 914 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 RNF8O76064 485 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 PEX11BO96011 259 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms