RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TRAF2Q12933 501 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 IFI16Q16666 785 aaKnown RBP17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 CDKN3Q16667 212 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 ALG1LQ6GMV1 187 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 TIGD7Q6NT04 549 aaPredicted RBP17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 ESRP1Q6NXG1 681 aaKnown RBP17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 GUSBP11Q6P575 273 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 HID1Q8IV36 788 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 MAPK15Q8TD08 544 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 SCG3Q8WXD2 468 aaKnown RBP17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 NAT6Q93015 286 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 TSACCQ96A04 125 aaPredicted RBP17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 FUBP1Q96AE4 644 aaKnown RBP17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 GRAMD1AQ96CP6 724 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 SCRN2Q96FV2 425 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 ABCG4Q9H172 646 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 KLQ9UEF7 1012 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 LRP4O75096 1905 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 ADAMTS20P59510 1910 aa17.98■□□□□ 0.47
CHMP2A-203ENST00000597209 CFAP47Q6ZTR5 3102 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 APC2O95996 2303 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 CPED1A4D0V7 1026 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 PSMD11O00231 422 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 AKR1B10O60218 316 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 FZD6O60353 706 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 HEXIM1O94992 359 aaKnown RBP17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 PGLSO95336 258 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 ARHGAP25P42331 645 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 MAXP61244 160 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 ACOX1Q15067 660 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 CNGA3Q16281 694 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 ARMC12Q5T9G4 340 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 PNCKQ6P2M8 343 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 EFL1Q7Z2Z2 1120 aaKnown RBP17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 GKN2Q86XP6 184 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 CPNE8Q86YQ8 564 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 SLC35F3Q8IY50 421 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 OR56A4Q8NGH8 313 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 WDR48Q8TAF3 677 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 PDCD6IPQ8WUM4 868 aaKnown RBP17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 MCCC1Q96RQ3 725 aaPredicted RBP17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 RBM15Q96T37 977 aaKnown RBP eCLIP17.97■□□□□ 0.474e-6■□□□□ 8.6
CHMP2A-203ENST00000597209 CHP1Q99653 195 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 POLR1EQ9GZS1 481 aaKnown RBP17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 NHEJ1Q9H9Q4 299 aaPredicted RBP17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 NT5MQ9NPB1 228 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 HAUS2Q9NVX0 235 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 ACACAQ13085 2346 aa17.97■□□□□ 0.47
CHMP2A-203ENST00000597209 ZNF487B1APH4 448 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 MFAP3LO75121 409 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 MTA2O94776 668 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 MX2P20592 715 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 TGM2P21980 687 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 VSIG1Q86XK7 387 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 RHOT2Q8IXI1 618 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 NDUFAF2Q8N183 169 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 PQLC3Q8N755 202 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 SLC35G2Q8TBE7 412 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 PIH1D2Q8WWB5 315 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 CCDC42Q96M95 316 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 PADI4Q9UM07 663 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 DOLKQ9UPQ8 538 aa17.96■□□□□ 0.47
CHMP2A-203ENST00000597209 FAM208BQ5VWN6 2430 aa17.96■□□□□ 0.46
CHMP2A-203ENST00000597209 SHROOM3Q8TF72 1996 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 TMEM202A6NGA9 273 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 A8MX80 341 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 TCEA3O75764 348 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 CELA2BP08218 269 aaPredicted RBP17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 KRT10P13645 584 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 KDELR1P24390 212 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 TEAD1P28347 426 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 GJC1P36383 396 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 TCEAL1Q15170 157 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 PERM1Q5SV97 790 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 C19orf48Q6RUI8 117 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 USP45Q70EL2 814 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 ARL10Q8N8L6 244 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 SNIP1Q8TAD8 396 aaKnown RBP17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 OR1E3Q8WZA6 343 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 NUS1Q96E22 293 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 RNF157Q96PX1 679 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 SEMA3CQ99985 751 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 WDR26Q9H7D7 661 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 INTUQ9ULD6 942 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 PCDHB1Q9Y5F3 818 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 RAI2Q9Y5P3 530 aa17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 COL27A1Q8IZC6 1860 aaPredicted RBP17.95■□□□□ 0.46
CHMP2A-203ENST00000597209 NPIPB15A6NHN6 443 aaPredicted RBP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 TLX3O43711 291 aaPredicted RBP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 BRINP1O60477 761 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 CSO75390 466 aaKnown RBP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 LHCGRP22888 699 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 ACTN2P35609 894 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 EIF2S3P41091 472 aaKnown RBP17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 MESDQ14696 234 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 ISXQ2M1V0 245 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 COL28A1Q2UY09 1125 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 RD3Q7Z3Z2 195 aa17.94■□□□□ 0.46
CHMP2A-203ENST00000597209 CNGA4Q8IV77 575 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms