RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 ALG1LQ6GMV1 187 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 TIGD7Q6NT04 549 aaPredicted RBP5.87□□□□□ -1.47
SSX4-201ENST00000595689 ZCCHC8Q6NZY4 707 aaKnown RBP5.87□□□□□ -1.47
SSX4-201ENST00000595689 GUSBP11Q6P575 273 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 CRTC1Q6UUV9 634 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 NPNTQ6UXI9 565 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 RFLNAQ6ZTI6 216 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 HSD11B1LQ7Z5J1 315 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 TSPAN33Q86UF1 283 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 HID1Q8IV36 788 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 CNGA4Q8IV77 575 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 RHOT2Q8IXI1 618 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 BBS5Q8N3I7 341 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.87□□□□□ -1.47
SSX4-201ENST00000595689 PAF1Q8N7H5 531 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 PLD5Q8N7P1 536 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 FAM181AQ8N9Y4 354 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 IFI44Q8TCB0 444 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 NSMCE1Q8WV22 266 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 BTN2A2Q8WVV5 523 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 PIH1D2Q8WWB5 315 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 OR1E3Q8WZA6 343 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 TSACCQ96A04 125 aaPredicted RBP5.87□□□□□ -1.47
SSX4-201ENST00000595689 KCTD12Q96CX2 325 aaKnown RBP5.87□□□□□ -1.47
SSX4-201ENST00000595689 HDAC11Q96DB2 347 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 NUS1Q96E22 293 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 TBATAQ96M53 351 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 CCDC42Q96M95 316 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 RNF157Q96PX1 679 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 SEMA3CQ99985 751 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 DUSP23Q9BVJ7 150 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 LGR4Q9BXB1 951 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 TRIM5Q9C035 493 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 RBSNQ9H1K0 784 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 FGF22Q9HCT0 170 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 MRPL40Q9NQ50 206 aaKnown RBP5.87□□□□□ -1.47
SSX4-201ENST00000595689 DTLQ9NZJ0 730 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 SPASTQ9UBP0 616 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 KLQ9UEF7 1012 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 VPS9D1Q9Y2B5 631 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 TTLL3Q9Y4R7 772 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 CSNK1G3Q9Y6M4 447 aa5.87□□□□□ -1.47
SSX4-201ENST00000595689 ARID1BQ8NFD5 2236 aaPredicted RBP5.87□□□□□ -1.47
SSX4-201ENST00000595689 CNOT1A5YKK6 2376 aaKnown RBP5.87□□□□□ -1.47
SSX4-201ENST00000595689 SCN8AQ9UQD0 1980 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 A0A1W2PQ67 120 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 CPED1A4D0V7 1026 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 EME2A4GXA9 379 aaPredicted RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 TMEM202A6NGA9 273 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 KCNK1O00180 336 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 TPP1O14773 563 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 MATN3O15232 486 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 YY2O15391 372 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 OPA1O60313 960 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 RASGRP1O95267 797 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 MT-CO3P00414 261 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 SOD1P00441 154 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 PRLP01236 227 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 GP1BAP07359 652 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 CDK4P11802 303 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 TNNT1P13805 278 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 CCNB1P14635 433 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 COMTP21964 271 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 TGM2P21980 687 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 CCNCP24863 283 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 HNF1BP35680 557 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 ETV3P41162 512 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 ARHGAP25P42331 645 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 PEX5P50542 639 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 HK3P52790 923 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 KIAA1024LP59773 190 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 SRP54P61011 504 aaKnown RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 POLR2LP62875 67 aaKnown RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 PPIDQ08752 370 aaKnown RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 ITKQ08881 620 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 ZBTB17Q13105 803 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 ACOX1Q15067 660 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 TCEAL1Q15170 157 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 NR0B2Q15466 257 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 TSR1Q2NL82 804 aaKnown RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 RALGPS1Q5JS13 557 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 ARMC12Q5T9G4 340 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 CDCP2Q5VXM1 449 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 SLC9A4Q6AI14 798 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 ESRP1Q6NXG1 681 aaKnown RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 PNCKQ6P2M8 343 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 B4GALNT4Q76KP1 1039 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 EFL1Q7Z2Z2 1120 aaKnown RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 RD3Q7Z3Z2 195 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 HEATR4Q86WZ0 1026 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 RFX6Q8HWS3 928 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 LRRC49Q8IUZ0 686 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 MAP7D3Q8IWC1 876 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 SFTPA2Q8IWL1 248 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 SLC35F3Q8IY50 421 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 CCDC13Q8IYE1 715 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 CBARPQ8N350 705 aaPredicted RBP5.86□□□□□ -1.47
SSX4-201ENST00000595689 DCBLD1Q8N8Z6 715 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 KYQ8NBH2 561 aa5.86□□□□□ -1.47
SSX4-201ENST00000595689 LPCAT1Q8NF37 534 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms