RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 A0A087X0T9 212 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 A0A0U1RQS6 177 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.08■□□□□ 0.32
CCDC9-202ENST00000595659 CFAP69A5D8W1 941 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 KLK10O43240 276 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 MAFKO60675 156 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 CD48P09326 243 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 FAM228BP0C875 321 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 PBX1P40424 430 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 PDX1P52945 283 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 UBASH3AP57075 661 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 ERVPABLB-1P60509 514 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 PIGHQ14442 188 aaPredicted RBP17.08■□□□□ 0.32
CCDC9-202ENST00000595659 PNCKQ6P2M8 343 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 LVRNQ6Q4G3 990 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 GPR155Q7Z3F1 870 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 TAF8Q7Z7C8 310 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 B3GNT8Q7Z7M8 397 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 CPNE8Q86YQ8 564 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 ATPAF2Q8N5M1 289 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 Q8N9G6 341 aaPredicted RBP17.08■□□□□ 0.32
CCDC9-202ENST00000595659 FAM46DQ8NEK8 389 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 CCL4L1Q8NHW4 92 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 KCNE4Q8WWG9 221 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 PRR11Q96HE9 360 aaPredicted RBP17.08■□□□□ 0.32
CCDC9-202ENST00000595659 SLC46A1Q96NT5 459 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 FOXP3Q9BZS1 431 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 TMEM168Q9H0V1 697 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 CYP4F12Q9HCS2 524 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 THSD1Q9NS62 852 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 MYLKQ15746 1914 aa17.08■□□□□ 0.32
CCDC9-202ENST00000595659 HTRA2O43464 458 aaPredicted RBP17.07■□□□□ 0.32
CCDC9-202ENST00000595659 TCEA3O75764 348 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 TNFSF15O95150 251 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 CPP00450 1065 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 SERPING1P05155 500 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 CTPS1P17812 591 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 CR2P20023 1033 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 GJC1P36383 396 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 CDH6P55285 790 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 KIAA1024LP59773 190 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 TPM4P67936 248 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 SLC25A11Q02978 314 aaKnown RBP17.07■□□□□ 0.32
CCDC9-202ENST00000595659 TRAF2Q12933 501 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 KRT81Q14533 505 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 CNGA3Q16281 694 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 ATP13A4Q4VNC1 1196 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC9-202ENST00000595659 SLC39A7Q92504 469 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 COQ10AQ96MF6 247 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 SMIM14Q96QK8 99 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 NUDCD1Q96RS6 583 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 WDR26Q9H7D7 661 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 NT5MQ9NPB1 228 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 WDR70Q9NW82 654 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 IP6K2Q9UHH9 426 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 DGKBQ9Y6T7 804 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 ATRXP46100 2492 aa17.07■□□□□ 0.32
CCDC9-202ENST00000595659 A0A1W2PQJ5 194 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 A0A1W2PQM1 296 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 GOLGA6CA6NDK9 693 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 GOLGA6BA6NDN3 693 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 B4DGG1 531 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 NTN3O00634 580 aaPredicted RBP17.06■□□□□ 0.32
CCDC9-202ENST00000595659 MAP3K6O95382 1288 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 CYP1A2P05177 515 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 RPLP0P05388 317 aaKnown RBP17.06■□□□□ 0.32
CCDC9-202ENST00000595659 GOLGA6DP0CG33 693 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 IL4RP24394 825 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 VIPR1P32241 457 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 ETV3P41162 512 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 MMP13P45452 471 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 CCDC122Q5T0U0 273 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 ARHGAP40Q5TG30 622 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 MARC1Q5VT66 337 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 RFLNAQ6ZTI6 216 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 HSD11B1LQ7Z5J1 315 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 TSPAN33Q86UF1 283 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 WDR36Q8NI36 951 aaKnown RBP17.06■□□□□ 0.32
CCDC9-202ENST00000595659 LRRN4Q8WUT4 740 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 NSMCE1Q8WV22 266 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 TEKT4Q8WW24 435 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 SYN2Q92777 582 aaPredicted RBP17.06■□□□□ 0.32
CCDC9-202ENST00000595659 GRAMD1AQ96CP6 724 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 NUS1Q96E22 293 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 GFM1Q96RP9 751 aaKnown RBP17.06■□□□□ 0.32
CCDC9-202ENST00000595659 MGME1Q9BQP7 344 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 EPB41L5Q9HCM4 733 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 GOLGA6AQ9NYA3 693 aa17.06■□□□□ 0.32
CCDC9-202ENST00000595659 BZW2Q9Y6E2 419 aaKnown RBP17.06■□□□□ 0.32
CCDC9-202ENST00000595659 IGSF10Q6WRI0 2623 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 NPIPB15A6NHN6 443 aaPredicted RBP17.05■□□□□ 0.32
CCDC9-202ENST00000595659 HEXIM1O94992 359 aaKnown RBP17.05■□□□□ 0.32
CCDC9-202ENST00000595659 LHCGRP22888 699 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 TRIM23P36406 574 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 HSPA9P38646 679 aaKnown RBP17.05■□□□□ 0.32
CCDC9-202ENST00000595659 ZBED6P86452 979 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 ITKQ08881 620 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 BROXQ5VW32 411 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 ALKBH5Q6P6C2 394 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms