RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 RALGPS1Q5JS13 557 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 VASH1Q7L8A9 365 aaPredicted RBP15.46■□□□□ 0.06
PNKP-204ENST00000594661 MIB1Q86YT6 1006 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 UNC5BQ8IZJ1 945 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 C2orf15Q8WU43 125 aaKnown RBP15.46■□□□□ 0.06
PNKP-204ENST00000594661 TOP1MTQ969P6 601 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 NACC2Q96BF6 587 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 ISOC1Q96CN7 298 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 TLR8Q9NR97 1041 aaKnown RBP15.46■□□□□ 0.06
PNKP-204ENST00000594661 MOCS1Q9NZB8 636 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 MPP6Q9NZW5 540 aa15.46■□□□□ 0.06
PNKP-204ENST00000594661 SLC38A8A6NNN8 435 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 DFFAO00273 331 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 FGF10O15520 208 aaPredicted RBP15.45■□□□□ 0.06
PNKP-204ENST00000594661 RFPL1O75677 317 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 BMP10O95393 424 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 EPHB1P54762 984 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 ADGRE1Q14246 886 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 RGS21Q2M5E4 152 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 C10orf120Q5SQS8 335 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 MROH9Q5TGP6 573 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 EGFLAMQ63HQ2 1017 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 STEAP4Q687X5 459 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 CDHR3Q6ZTQ4 885 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 CHERPQ8IWX8 916 aaKnown RBP15.45■□□□□ 0.06
PNKP-204ENST00000594661 ZSCAN18Q8TBC5 510 aaPredicted RBP15.45■□□□□ 0.06
PNKP-204ENST00000594661 PSD2Q9BQI7 771 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 TDRD1Q9BXT4 1180 aaKnown RBP15.45■□□□□ 0.06
PNKP-204ENST00000594661 SLC13A1Q9BZW2 595 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 MAGED2Q9UNF1 606 aaPredicted RBP15.45■□□□□ 0.06
PNKP-204ENST00000594661 ERVK-11Q9UQG0 969 aa15.45■□□□□ 0.06
PNKP-204ENST00000594661 A0A1B0GTW7 788 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ANKRD34BA5PLL1 514 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 SORBS2O94875 1100 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 CSF2RAP15509 400 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 HTR7P34969 479 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 RFC2P35250 354 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 SERPINB9P50453 376 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ALDH18A1P54886 795 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 MLLT6P55198 1093 aaPredicted RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 RPL10AP62906 217 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 CDKL1Q00532 357 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ATP1A4Q13733 1029 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 NR1D2Q14995 579 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 SPOUT1Q5T280 376 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 C6orf52Q5T4I8 152 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ZNF689Q96CS4 500 aaPredicted RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 CCDC138Q96M89 665 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 C11orf49Q9H6J7 331 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 CATSPERBQ9H7T0 1116 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 CCSER2Q9H7U1 834 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 RC3H2Q9HBD1 1191 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 SYBUQ9NX95 663 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 MARCH2Q9P0N8 246 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 RIMS3Q9UJD0 308 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ERGIC3Q9Y282 383 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ITM2BQ9Y287 266 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 BACE2Q9Y5Z0 518 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 H6PDO95479 791 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 HMBSP08397 361 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ZDHHC11BP0C7U3 371 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 PGAM1P18669 254 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 KPNA1P52294 538 aaPredicted RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 TXNL4AP83876 142 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 NRG1Q02297 640 aaPredicted RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 UBAP2LQ14157 1087 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 E2F2Q14209 437 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 MOGQ16653 247 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 TEX44Q53QW1 395 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 CYS1Q717R9 158 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ZNF683Q8IZ20 524 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 FBXW8Q8N3Y1 598 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 ARNTL2Q8WYA1 636 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 TRIM43Q96BQ3 446 aaPredicted RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 C12orf43Q96C57 262 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 C1orf74Q96LT6 269 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 CLSTN3Q9BQT9 956 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 SLC39A8Q9C0K1 460 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 EHD1Q9H4M9 534 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 PRDM5Q9NQX1 630 aaPredicted RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 EBF1Q9UH73 591 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 CNOT11Q9UKZ1 510 aaKnown RBP15.44■□□□□ 0.06
PNKP-204ENST00000594661 VANGL2Q9ULK5 521 aa15.44■□□□□ 0.06
PNKP-204ENST00000594661 HMX2A2RU54 273 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 H3BNH8 94 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 PSMD12O00232 456 aaPredicted RBP15.43■□□□□ 0.06
PNKP-204ENST00000594661 MTSS1O43312 755 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 ALDH1A2O94788 518 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 SEC24AO95486 1093 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 JCHAINP01591 159 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 SLC2A3P11169 496 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 PSMC3P17980 439 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 UGT1A6P19224 532 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 NFKB1P19838 968 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 UGT1A1P22309 533 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 UGT1A4P22310 534 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 UGT1A3P35503 534 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 UGT1A5P35504 534 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 PCYT1AP49585 367 aa15.43■□□□□ 0.06
PNKP-204ENST00000594661 COPAP53621 1224 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms