RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 A0A0J9YYE9 177 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 HMX2A2RU54 273 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 C2orf81A6NN90 581 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 TRBC1P01850 177 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 APODP05090 189 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 ALPIP09923 528 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 GP5P40197 560 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 TMPRSS15P98073 1019 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 ZNF234Q14588 700 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 PREPLQ4J6C6 727 aaPredicted RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 GDPD4Q6W3E5 623 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 TTC30BQ8N4P2 665 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 GRIN3AQ8TCU5 1115 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 UCMAQ8WVF2 138 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 HDAC10Q969S8 669 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 GUCD1Q96NT3 240 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 FBRSL1Q9HCM7 1045 aaKnown RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 NLE1Q9NVX2 485 aaPredicted RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 LIMD1Q9UGP4 676 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 HCN2Q9UL51 889 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 A0A0U1RQS6 177 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 ANTXRLA6NF34 631 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 SRRM3A6NNA2 597 aaPredicted RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 TRIM49D1C9J1S8 452 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 SLC7A4O43246 635 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 SIN3BO75182 1162 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 SPAG7O75391 227 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 LEFTY1O75610 366 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 RPP40O75818 363 aaKnown RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 CTSLP07711 333 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 F7P08709 466 aaPredicted RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 HLA-EP13747 358 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 FOSL2P15408 326 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 PSMA3P25788 255 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 SLC18A1P54219 525 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 THOC5Q13769 683 aaKnown RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 BMPR2Q13873 1038 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 HNRNPA1L2Q32P51 320 aaKnown RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 NEPROQ6NW34 567 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 STRA8Q7Z7C7 330 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 OR4K2Q8NGD2 314 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 MGARPQ8TDB4 240 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 DYDC1Q8WWB3 177 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 ATXN2LQ8WWM7 1075 aaKnown RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 HLA-CQ95604 372 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 TBATAQ96M53 351 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 KLHL32Q96NJ5 620 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 PHF7Q9BWX1 381 aaPredicted RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 TMEM245Q9H330 911 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 MFSD1Q9H3U5 465 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 KCNK12Q9HB15 430 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 NSMCE4AQ9NXX6 385 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 THAP10Q9P2Z0 257 aaPredicted RBP15.22■□□□□ 0.03
VRK3-207ENST00000594092 PHTF1Q9UMS5 762 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 ZNF711Q9Y462 761 aa15.22■□□□□ 0.03
VRK3-207ENST00000594092 SLC4A1P02730 911 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 LPOP22079 712 aaPredicted RBP15.21■□□□□ 0.03
VRK3-207ENST00000594092 HNF1BP35680 557 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 GALK1P51570 392 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 PRAMEP78395 509 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 ARSIQ5FYB1 569 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 GRTP1Q5TC63 336 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 MROH9Q5TGP6 573 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 GPR153Q6NV75 609 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 DENND6AQ8IWF6 608 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 OR6P1Q8NGX9 317 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 SGSM3Q96HU1 749 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 FAM167BQ9BTA0 163 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 MCMBPQ9BTE3 642 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 SUDS3Q9H7L9 328 aaPredicted RBP15.21■□□□□ 0.03
VRK3-207ENST00000594092 IL36AQ9UHA7 158 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 PPIL1Q9Y3C6 166 aa15.21■□□□□ 0.03
VRK3-207ENST00000594092 EDDM13A0A1B0GTR0 161 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 A0A1W2PQ67 120 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 CCDC162PA2VCL2 907 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 OR51F1A6NGY5 319 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 CAPN8A6NHC0 703 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SLC1A2P43004 574 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 CSE1LP55060 971 aaKnown RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 PDE1BQ01064 536 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 CTBP1Q13363 440 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 C9orf64Q5T6V5 341 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 EGFLAMQ63HQ2 1017 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 ZNF470Q6ECI4 717 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SERPINA13PQ6UXR4 307 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 NUDT18Q6ZVK8 323 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 LYSMD3Q7Z3D4 306 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 PTAR1Q7Z6K3 402 aaPredicted RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 PLCD3Q8N3E9 789 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SLC44A3Q8N4M1 653 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 EID2BQ96D98 161 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 CDKN2AIPNLQ96HQ2 116 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 LRIG1Q96JA1 1093 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SERAC1Q96JX3 654 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 RBBP8Q99708 897 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 P2RY13Q9BPV8 354 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 GPR63Q9BZJ6 419 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 EPN3Q9H201 632 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 TRPV5Q9NQA5 729 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms