RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 LOXL2Q9Y4K0 774 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 HEMK1Q9Y5R4 338 aaPredicted RBP14.82□□□□□ -0.04
PNKP-202ENST00000593706 FLNCQ14315 2725 aa14.82□□□□□ -0.04
PNKP-202ENST00000593706 WASH4PA8MWX3 477 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 J3KR12 359 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 LIPCP11150 499 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 KELP23276 732 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 AGERQ15109 404 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 CERCAMQ5T4B2 595 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 DCUN1D2Q6PH85 259 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 PLA2G15Q8NCC3 412 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 FAM46DQ8NEK8 389 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 OR56A4Q8NGH8 313 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 CELF6Q96J87 481 aaKnown RBP14.81□□□□□ -0.04
PNKP-202ENST00000593706 CNPY3Q9BT09 278 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 CINPQ9BW66 212 aaPredicted RBP14.81□□□□□ -0.04
PNKP-202ENST00000593706 FAM117AQ9C073 453 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 SP110Q9HB58 689 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 PDFQ9HBH1 243 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 FGF22Q9HCT0 170 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 SEPT10Q9P0V9 454 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 MOSPD1Q9UJG1 213 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 DGKBQ9Y6T7 804 aa14.81□□□□□ -0.04
PNKP-202ENST00000593706 TMEM202A6NGA9 273 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 ARHGAP42A6NI28 874 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 ATMINO43313 823 aaPredicted RBP14.8□□□□□ -0.04
PNKP-202ENST00000593706 PRAMEF11O60813 436 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 PALMO75781 387 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 GZMAP12544 262 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 GLB1P16278 677 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 ITIH1P19827 911 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 HTR7P34969 479 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 NDST2P52849 883 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 KIAA1024LP59773 190 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 NFATC3Q12968 1075 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 ARHGEF7Q14155 803 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 TGIF1Q15583 401 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 MAP9Q49MG5 647 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 MANEAQ5SRI9 462 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 PHF19Q5T6S3 580 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 KCTD16Q68DU8 428 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 PPP1R2P3Q6NXS1 205 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 SPRED1Q7Z699 444 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 SRLQ86TD4 932 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 ZSWIM9Q86XI8 627 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 ARFGAP1Q8N6T3 406 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 GPR156Q8NFN8 814 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 OR1E3Q8WZA6 343 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 SYN2Q92777 582 aaPredicted RBP14.8□□□□□ -0.04
PNKP-202ENST00000593706 FUBP1Q96AE4 644 aaKnown RBP14.8□□□□□ -0.04
PNKP-202ENST00000593706 SGF29Q96ES7 293 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 DPEP2Q9H4A9 486 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 LRRC19Q9H756 370 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 MRPL40Q9NQ50 206 aaKnown RBP14.8□□□□□ -0.04
PNKP-202ENST00000593706 GPATCH2LQ9NWQ4 482 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 AP4E1Q9UPM8 1137 aa14.8□□□□□ -0.04
PNKP-202ENST00000593706 PRAMEF33A0A0G2JMD5 474 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 EEF2KO00418 725 aaKnown RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 NVLO15381 856 aaKnown RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 BUB1BO60566 1050 aaPredicted RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 PRAMEF10O60809 474 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 RECQL5O94762 991 aaPredicted RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 GYPCP04921 128 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 TNFAIP3P21580 790 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 RGRP47804 291 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 MAPK10P53779 464 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 UBASH3AP57075 661 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 KCNC4Q03721 635 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 BCL2L1Q07817 233 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 KLHL30Q0D2K2 578 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 SKOR2Q2VWA4 1001 aaPredicted RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 C14orf28Q4W4Y0 310 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 CYP4V2Q6ZWL3 525 aaPredicted RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 TSEN2Q8NCE0 465 aaKnown RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 EXTL1Q92935 676 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 TMEM159Q96B96 161 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 CMKLR1Q99788 373 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 TRIM7Q9C029 511 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 TMEM168Q9H0V1 697 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 DHX35Q9H5Z1 703 aaKnown RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 WDR26Q9H7D7 661 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 SUDS3Q9H7L9 328 aaPredicted RBP14.79□□□□□ -0.04
PNKP-202ENST00000593706 CYP4F12Q9HCS2 524 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 LRIT1Q9P2V4 623 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 APPL1Q9UKG1 709 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 ACSL6Q9UKU0 697 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 RNF215Q9Y6U7 377 aa14.79□□□□□ -0.04
PNKP-202ENST00000593706 CFAP69A5D8W1 941 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 TMEM191CA6NGB0 347 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 TMCO5BA8MYB1 307 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 DFFAO00273 331 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 EFSO43281 561 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 DAPK3O43293 454 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 NOBOXO60393 691 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 FTLP02792 175 aaPredicted RBP14.78□□□□□ -0.04
PNKP-202ENST00000593706 SKILP12757 684 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 PNLIPP16233 465 aa14.78□□□□□ -0.04
PNKP-202ENST00000593706 PAPOLAP51003 745 aaKnown RBP14.78□□□□□ -0.04
PNKP-202ENST00000593706 POLR2LP62875 67 aaKnown RBP14.78□□□□□ -0.04
PNKP-202ENST00000593706 TPM4P67936 248 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms