RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 KCTD15Q96SI1 283 aaPredicted RBP16.41■□□□□ 0.22
LIG1-205ENST00000593425 SP110Q9HB58 689 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 CYP4F12Q9HCS2 524 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 FOXJ2Q9P0K8 574 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 LRIT1Q9P2V4 623 aa16.41■□□□□ 0.22
LIG1-205ENST00000593425 UNC13CQ8NB66 2214 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 DFFAO00273 331 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 TRAFD1O14545 582 aaPredicted RBP16.4■□□□□ 0.22
LIG1-205ENST00000593425 TNFRSF10CO14798 259 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 NVLO15381 856 aaKnown RBP16.4■□□□□ 0.22
LIG1-205ENST00000593425 PNLIPP16233 465 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 ERCC2P18074 760 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 PSMA2P25787 234 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 TRIM23P36406 574 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 RBM43Q6ZSC3 357 aaKnown RBP16.4■□□□□ 0.22
LIG1-205ENST00000593425 RFX8Q6ZV50 586 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 CYP4V2Q6ZWL3 525 aaPredicted RBP16.4■□□□□ 0.22
LIG1-205ENST00000593425 USP53Q70EK8 1073 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 VASH2Q86V25 355 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 ZFAND4Q86XD8 727 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 COL26A1Q96A83 441 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 SGF29Q96ES7 293 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 SYT11Q9BT88 431 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 DPEP2Q9H4A9 486 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 WDR26Q9H7D7 661 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 DONSONQ9NYP3 566 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 PCSK1NQ9UHG2 260 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 MOSPD1Q9UJG1 213 aa16.4■□□□□ 0.22
LIG1-205ENST00000593425 PRSS38A1L453 326 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 TTC24A2A3L6 582 aaPredicted RBP16.39■□□□□ 0.21
LIG1-205ENST00000593425 TMCO5BA8MYB1 307 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 TEX33O43247 280 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 HOXC4P09017 264 aaPredicted RBP16.39■□□□□ 0.21
LIG1-205ENST00000593425 DESP17661 470 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 WT1P19544 449 aaPredicted RBP16.39■□□□□ 0.21
LIG1-205ENST00000593425 KELP23276 732 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 SCNN1BP51168 640 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 MAPK10P53779 464 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 MAZP56270 477 aaKnown RBP16.39■□□□□ 0.21
LIG1-205ENST00000593425 B4GALNT1Q00973 533 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 IL10RBQ08334 325 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 NFATC3Q12968 1075 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 MAMLD1Q13495 774 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 ARHGEF7Q14155 803 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 C16orf72Q14CZ0 275 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 ACOX1Q15067 660 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 ERMARDQ5T6L9 678 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 PNCKQ6P2M8 343 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 APTXQ7Z2E3 356 aaKnown RBP16.39■□□□□ 0.21
LIG1-205ENST00000593425 PRICKLE2Q7Z3G6 844 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 PAF1Q8N7H5 531 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 EXTL1Q92935 676 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 USP7Q93009 1102 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 SEMA6CQ9H3T2 930 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 SUDS3Q9H7L9 328 aaPredicted RBP16.39■□□□□ 0.21
LIG1-205ENST00000593425 RDH14Q9HBH5 336 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 LMBRD1Q9NUN5 540 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 B4GALT6Q9UBX8 382 aa16.39■□□□□ 0.21
LIG1-205ENST00000593425 ARHGEF17Q96PE2 2063 aaPredicted RBP16.39■□□□□ 0.21
LIG1-205ENST00000593425 CYSRT1A8MQ03 144 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 EIF3CLB5ME19 914 aaKnown RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 C9orf172C9J069 976 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 DAPK3O43293 454 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 B4GAT1O43505 415 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 NUDT21O43809 227 aaKnown RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 FUCA1P04066 466 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 MYCLP1P12525 358 aaPredicted RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 FERP16591 822 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 NSUN2Q08J23 767 aaKnown RBP eCLIP16.38■□□□□ 0.21
LIG1-205ENST00000593425 SLC10A7Q0GE19 358 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 RFTN1Q14699 578 aaPredicted RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 CNGA3Q16281 694 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 PHF19Q5T6S3 580 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 PLEKHA7Q6IQ23 1121 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 IRF2BP2Q7Z5L9 587 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 NRROSQ86YC3 692 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 PTCD2Q8WV60 388 aaKnown RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 TMEM159Q96B96 161 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 NUS1Q96E22 293 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 COQ10AQ96MF6 247 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 EIF3CQ99613 913 aaKnown RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 CMKLR1Q99788 373 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 TRIM7Q9C029 511 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 HSD3B7Q9H2F3 369 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 CLMPQ9H6B4 373 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 CARS2Q9HA77 564 aaKnown RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 SPATS2LQ9NUQ6 558 aaKnown RBP16.38■□□□□ 0.21
LIG1-205ENST00000593425 PCDHGA4Q9Y5G9 962 aa16.38■□□□□ 0.21
LIG1-205ENST00000593425 WISP1O95388 367 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 CCNB1P14635 433 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 MIPP30301 263 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 AP1S1P61966 158 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 POLR2LP62875 67 aaKnown RBP16.37■□□□□ 0.21
LIG1-205ENST00000593425 MYL5Q02045 173 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 LBRQ14739 615 aaKnown RBP16.37■□□□□ 0.21
LIG1-205ENST00000593425 MANEAQ5SRI9 462 aa16.37■□□□□ 0.21
LIG1-205ENST00000593425 C17orf82Q86X59 251 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms