RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ARHGEF17Q96PE2 2063 aaPredicted RBP13.28□□□□□ -0.28
H3F3B-213ENST00000593254 NBASA2RRP1 2371 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 SPENQ96T58 3664 aaKnown RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 A0A1W2PNU3 283 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 CFAP69A5D8W1 941 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 TRAFD1O14545 582 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 MAFKO60675 156 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 CR2P20023 1033 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 SERPINB6P35237 376 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 LIG3P49916 1009 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 PEX5P50542 639 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 SCNN1BP51168 640 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 RENBPP51606 427 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 KIAA1614Q5VZ46 1190 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 ZCCHC8Q6NZY4 707 aaKnown RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 PHACTR4Q8IZ21 702 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 RBFAQ8N0V3 343 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 ZNF564Q8TBZ8 553 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 FAM71BQ8TC56 605 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 SLC46A1Q96NT5 459 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 DNAJC7Q99615 494 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 TCEAL2Q9H3H9 227 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 RCOR3Q9P2K3 495 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 SPASTQ9UBP0 616 aa13.27□□□□□ -0.29
H3F3B-213ENST00000593254 APOBEC3BQ9UH17 382 aaKnown RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 USP9YO00507 2555 aaPredicted RBP13.27□□□□□ -0.29
H3F3B-213ENST00000593254 TPP1O14773 563 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 GCATO75600 419 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 PRKCGP05129 697 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 MYF5P13349 255 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 IL4RP24394 825 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 HSPA9P38646 679 aaKnown RBP13.26□□□□□ -0.29
H3F3B-213ENST00000593254 DUSP3P51452 185 aaPredicted RBP13.26□□□□□ -0.29
H3F3B-213ENST00000593254 CDH6P55285 790 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 POLR2LP62875 67 aaKnown RBP13.26□□□□□ -0.29
H3F3B-213ENST00000593254 NOTCH2Q04721 2471 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 RALGDSQ12967 914 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 TRIM14Q14142 442 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 ZNF235Q14590 738 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 DEFB133Q30KQ1 61 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 PRRT3Q5FWE3 981 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 LCE2DQ5TA82 110 aaPredicted RBP13.26□□□□□ -0.29
H3F3B-213ENST00000593254 PRICKLE2Q7Z3G6 844 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 PGBD5Q8N414 524 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 ATPAF2Q8N5M1 289 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 LMX1AQ8TE12 382 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 LRRC61Q9BV99 259 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 EVA1BQ9NVM1 165 aa13.26□□□□□ -0.29
H3F3B-213ENST00000593254 UNC13CQ8NB66 2214 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-213ENST00000593254 TMEM110-MUSTN1A8MSY1 372 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 LMO7DNF2Z398 122 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 TERTO14746 1132 aaKnown RBP13.25□□□□□ -0.29
H3F3B-213ENST00000593254 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 HTRA2O43464 458 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-213ENST00000593254 PROSCO94903 275 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 CD48P09326 243 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 ARSEP51690 589 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 PPARDQ03181 441 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 MTM1Q13496 603 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 KRT81Q14533 505 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 INPP5AQ14642 412 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 NFATC4Q14934 902 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 SLC18A3Q16572 532 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 HADHQ16836 314 aaKnown RBP13.25□□□□□ -0.29
H3F3B-213ENST00000593254 ISXQ2M1V0 245 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 ASTE1Q2TB18 679 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-213ENST00000593254 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 LIPIQ6XZB0 460 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 DPPA4Q7L190 304 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 LRRC49Q8IUZ0 686 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 EXD3Q8N9H8 876 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 OR8K1Q8NGG5 319 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 PRR11Q96HE9 360 aaPredicted RBP13.25□□□□□ -0.29
H3F3B-213ENST00000593254 NUDCD1Q96RS6 583 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 IL12RB2Q99665 862 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 MGME1Q9BQP7 344 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 APOOQ9BUR5 198 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 BOCQ9BWV1 1114 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 SLC13A1Q9BZW2 595 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 NCKIPSDQ9NZQ3 722 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 UVRAGQ9P2Y5 699 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 SALL4Q9UJQ4 1053 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 SATB2Q9UPW6 733 aa13.25□□□□□ -0.29
H3F3B-213ENST00000593254 MYO9AB2RTY4 2548 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 UTP20O75691 2785 aaKnown RBP13.24□□□□□ -0.29
H3F3B-213ENST00000593254 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 SSU72P8A0A1W2PR75 194 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 TTC24A2A3L6 582 aaPredicted RBP13.24□□□□□ -0.29
H3F3B-213ENST00000593254 CDRT15L2A8MXV6 281 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 SOCS5O75159 536 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 RECQL5O94762 991 aaPredicted RBP13.24□□□□□ -0.29
H3F3B-213ENST00000593254 H2AFZP0C0S5 128 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 TSHRP16473 764 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 GM2AP17900 193 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 HTR1BP28222 390 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 BLKP51451 505 aa13.24□□□□□ -0.29
H3F3B-213ENST00000593254 HK3P52790 923 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms