RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 DOLKQ9UPQ8 538 aa7.47□□□□□ -1.21
VAT1-209ENST00000592388 FARP1Q9Y4F1 1045 aaPredicted RBP7.47□□□□□ -1.21
VAT1-209ENST00000592388 FADS3Q9Y5Q0 445 aa7.47□□□□□ -1.21
VAT1-209ENST00000592388 B3GALT1Q9Y5Z6 326 aa7.47□□□□□ -1.21
VAT1-209ENST00000592388 HS3ST3A1Q9Y663 406 aa7.47□□□□□ -1.21
VAT1-209ENST00000592388 DIDO1Q9BTC0 2240 aaKnown RBP7.47□□□□□ -1.21
VAT1-209ENST00000592388 PCSK5Q92824 1860 aa7.47□□□□□ -1.21
VAT1-209ENST00000592388 LOC101059948A0A1B0GTJ6 334 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 PAK4O96013 591 aaPredicted RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 UGT2B4P06133 528 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 FGF3P11487 239 aaPredicted RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 ITIH2P19823 946 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 EEF1GP26641 437 aaKnown RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 SDC4P31431 198 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 SOX5P35711 763 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 RABIFP47224 123 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 LEPRP48357 1165 aaKnown RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 GLIPR1L2Q4G1C9 344 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 CARD16Q5EG05 197 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 EFHC2Q5JST6 749 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 CDKAL1Q5VV42 579 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 NEK5Q6P3R8 708 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 SPNS3Q6ZMD2 512 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 ZNF783Q6ZMS7 281 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 NYAP1Q6ZVC0 841 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 SLITRK4Q8IW52 837 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 PHACTR4Q8IZ21 702 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 PCDH20Q8N6Y1 951 aaKnown RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 MSANTD4Q8NCY6 345 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 RCBTB1Q8NDN9 531 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 PCDH19Q8TAB3 1148 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 FAM174AQ8TBP5 190 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 FAM172AQ8WUF8 416 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 STARD8Q92502 1023 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 ARHGEF2Q92974 986 aaKnown RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 KIAA1143Q96AT1 154 aaPredicted RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 PPP1R16AQ96I34 528 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 EXOC2Q96KP1 924 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 HEPHQ9BQS7 1158 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 MFRPQ9BY79 579 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 SLC17A9Q9BYT1 436 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 CEP44Q9C0F1 390 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 KLC2Q9H0B6 622 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 NOL6Q9H6R4 1146 aaKnown RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 CYP4F12Q9HCS2 524 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 LMBRD1Q9NUN5 540 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 HECAQ9UBI9 543 aaPredicted RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 PPARGC1AQ9UBK2 798 aaKnown RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 OR12D3Q9UGF7 316 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 PNMA8BQ9ULN7 279 aaPredicted RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 SIK3Q9Y2K2 1263 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 KCTD3Q9Y597 815 aa7.46□□□□□ -1.22
VAT1-209ENST00000592388 MRPS18BQ9Y676 258 aaKnown RBP7.46□□□□□ -1.22
VAT1-209ENST00000592388 CROCCQ5TZA2 2017 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 IGLON5A6NGN9 336 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 C16orf96A6NNT2 1141 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 PRSS44E7EML9 344 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 KRIT1O00522 736 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 CCP110O43303 1012 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 SORBS2O94875 1100 aaKnown RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 TMCC1O94876 653 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 UNGP13051 313 aaPredicted RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 RHOQP17081 205 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 GPD1P21695 349 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 L1CAMP32004 1257 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 RFC1P35251 1148 aaPredicted RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 ADRA1BP35368 520 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 IGFALSP35858 605 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 MC1RQ01726 317 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 NRG1Q02297 640 aaPredicted RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 NR6A1Q15406 480 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 SYCP1Q15431 976 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 FAXCQ5TGI0 409 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 KIAA1161Q6NSJ0 714 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 RETSATQ6NUM9 610 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 MON1BQ7L1V2 547 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 ART4Q93070 314 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 TBC1D31Q96DN5 1066 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 HMCESQ96FZ2 354 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 KLHL32Q96NJ5 620 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 KLF6Q99612 283 aaPredicted RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 SLC13A1Q9BZW2 595 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 RDH14Q9HBH5 336 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 SEPT11Q9NVA2 429 aaKnown RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 FANCLQ9NW38 375 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 TMEM248Q9NWD8 314 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 PCDHGA3Q9Y5H0 932 aa7.45□□□□□ -1.22
VAT1-209ENST00000592388 TNRC6AQ8NDV7 1962 aaKnown RBP7.45□□□□□ -1.22
VAT1-209ENST00000592388 TCRBV5S1A1TA0A578 114 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 LGALS16A8MUM7 142 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 BHMG1C9JSJ3 638 aaPredicted RBP7.44□□□□□ -1.22
VAT1-209ENST00000592388 NEMP1O14524 444 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 FPGTO14772 594 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 INSIG1O15503 277 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 ATMINO43313 823 aaPredicted RBP7.44□□□□□ -1.22
VAT1-209ENST00000592388 BUB1O43683 1085 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 RAMP2O60895 175 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 RFPL1O75677 317 aa7.44□□□□□ -1.22
VAT1-209ENST00000592388 DNAJB5O75953 348 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms