RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 BUB1O43683 1085 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 KDELR3O43731 214 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 SASH3O75995 380 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 UGT2B4P06133 528 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 ITGA2BP08514 1039 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 MYF5P13349 255 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 UCHL3P15374 230 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 EPB42P16452 691 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 INHBCP55103 352 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 ZBED6P86452 979 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 EIF2B5Q13144 721 aaKnown RBP9.53□□□□□ -0.88
BRCA1-226ENST00000591534 INO80DQ53TQ3 878 aaPredicted RBP9.53□□□□□ -0.88
BRCA1-226ENST00000591534 C2CD6Q53TS8 623 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 ERAP2Q6P179 960 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 TRIM72Q6ZMU5 477 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 STRADAQ7RTN6 431 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 APTXQ7Z2E3 356 aaKnown RBP9.53□□□□□ -0.88
BRCA1-226ENST00000591534 BNIPLQ7Z465 357 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 GKN2Q86XP6 184 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 TMTC1Q8IUR5 882 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 ARL10Q8N8L6 244 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 HCAR2Q8TDS4 363 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 UBE2Q2Q8WVN8 375 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 CPA5Q8WXQ8 436 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 CENPTQ96BT3 561 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 MED8Q96G25 268 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 KLHL32Q96NJ5 620 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 NCAPGQ9BPX3 1015 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 CCDC3Q9BQI4 270 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 TTYH3Q9C0H2 523 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 GANQ9H2C0 597 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 SYNDIG1Q9H7V2 258 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 TMEM248Q9NWD8 314 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 DKK3Q9UBP4 350 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 DNAI1Q9UI46 699 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 CAPN11Q9UMQ6 739 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 ENTPD2Q9Y5L3 495 aa9.53□□□□□ -0.88
BRCA1-226ENST00000591534 NYNRINQ9P2P1 1898 aaKnown RBP9.53□□□□□ -0.88
BRCA1-226ENST00000591534 HELZ2Q9BYK8 2649 aaKnown RBP9.52□□□□□ -0.88
BRCA1-226ENST00000591534 K7ENP7 123 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 AREL1O15033 823 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 YY2O15391 372 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 ARHGAP6O43182 974 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 ZW10O43264 779 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 ZSCAN12O43309 604 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 MMP20O60882 483 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 TNFSF15O95150 251 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 RASGRP1O95267 797 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 GJB6O95452 261 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 PLEKP08567 350 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 KRT3P12035 628 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 ACVRL1P37023 503 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 EIF4A3P38919 411 aaKnown RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 PTPN9P43378 593 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 YBEYP58557 167 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 RHOAP61586 193 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 LRRC14Q15048 493 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 SYCP1Q15431 976 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 CDO1Q16878 200 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 SAMD5Q5TGI4 173 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 NAA35Q5VZE5 725 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 INO80CQ6PI98 192 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 CLEC14AQ86T13 490 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 NOP9Q86U38 636 aaKnown RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 NLRP14Q86W24 1093 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 SLC35F3Q8IY50 421 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 CCDC170Q8IYT3 715 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 OR6K2Q8NGY2 324 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 SLC20A1Q8WUM9 679 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 RXFP2Q8WXD0 754 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 TMEM159Q96B96 161 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 LIN37Q96GY3 246 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 TMEM74Q96NL1 305 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 GFM1Q96RP9 751 aaKnown RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 CCNL2Q96S94 520 aaPredicted RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 CATSPERBQ9H7T0 1116 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 METTL5Q9NRN9 209 aaKnown RBP9.52□□□□□ -0.89
BRCA1-226ENST00000591534 SEPT10Q9P0V9 454 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 GULP1Q9UBP9 304 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 KLF15Q9UIH9 416 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 SIK3Q9Y2K2 1263 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 MFHAS1Q9Y4C4 1052 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 PCDHGC4Q9Y5F7 938 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 PCDHGA7Q9Y5G6 932 aa9.52□□□□□ -0.89
BRCA1-226ENST00000591534 CDRT15L2A8MXV6 281 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 F8VZ95 297 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 KIF2AO00139 706 aaPredicted RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 RNF103O00237 685 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 PLD2O14939 933 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 CPNE3O75131 537 aaKnown RBP9.51□□□□□ -0.89
BRCA1-226ENST00000591534 GCATO75600 419 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 GFPT2O94808 682 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 LRIG2O94898 1065 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 CD160O95971 181 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 MMEP08473 750 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 JMJD7P0C870 316 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 SFTPCP11686 197 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 TSHRP16473 764 aa9.51□□□□□ -0.89
BRCA1-226ENST00000591534 MMP8P22894 467 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms