RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 NUDT22Q9BRQ3 303 aa17.42■□□□□ 0.38
RETREG3-210ENST00000590541 DPEP2Q9H4A9 486 aa17.42■□□□□ 0.38
RETREG3-210ENST00000590541 RETREG1Q9H6L5 497 aa17.42■□□□□ 0.38
RETREG3-210ENST00000590541 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
RETREG3-210ENST00000590541 ZNF71Q9NQZ8 489 aaPredicted RBP17.42■□□□□ 0.38
RETREG3-210ENST00000590541 AKAP7Q9P0M2 348 aaPredicted RBP17.42■□□□□ 0.38
RETREG3-210ENST00000590541 USP9YO00507 2555 aaPredicted RBP17.42■□□□□ 0.38
RETREG3-210ENST00000590541 ANKRD36A6QL64 1941 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 IGHV5-10-1A0A0J9YXX1 117 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 BLACEA4D250 179 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 GOLGA8SH3BPF8 625 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 HGSO14964 777 aaPredicted RBP17.41■□□□□ 0.38
RETREG3-210ENST00000590541 EPHB6O15197 1021 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 BUB1O43683 1085 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 RAMP2O60895 175 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 PIGNO95427 931 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 XPAP23025 273 aaPredicted RBP17.41■□□□□ 0.38
RETREG3-210ENST00000590541 NSFP46459 744 aaKnown RBP17.41■□□□□ 0.38
RETREG3-210ENST00000590541 LIG3P49916 1009 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 MAZP56270 477 aaKnown RBP17.41■□□□□ 0.38
RETREG3-210ENST00000590541 GSCP56915 257 aaPredicted RBP17.41■□□□□ 0.38
RETREG3-210ENST00000590541 OR1D5P58170 312 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 KIAA1024LP59773 190 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 RHOAP61586 193 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 UGP2Q16851 508 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 AMZ1Q400G9 498 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 AOPEPQ8N6M6 819 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 SLC20A1Q8WUM9 679 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 FUBP1Q96AE4 644 aaKnown RBP17.41■□□□□ 0.38
RETREG3-210ENST00000590541 KLC2Q9H0B6 622 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 TMEM63CQ9P1W3 806 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 MYO6Q9UM54 1294 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 PLAAQ9Y263 795 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 B3GALT1Q9Y5Z6 326 aa17.41■□□□□ 0.38
RETREG3-210ENST00000590541 SPENQ96T58 3664 aaKnown RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 TSPAN11A1L157 253 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 LRIG2O94898 1065 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 UNGP13051 313 aaPredicted RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 CHRNB2P17787 502 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 ADRA1BP35368 520 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 ATP11AP98196 1134 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 NR1D2Q14995 579 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 INO80DQ53TQ3 878 aaPredicted RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 PPP1R2P3Q6NXS1 205 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 APTXQ7Z2E3 356 aaKnown RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 ZNF438Q7Z4V0 828 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 C17orf82Q86X59 251 aaPredicted RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 C9orf43Q8TAL5 461 aaPredicted RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 HCAR2Q8TDS4 363 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 CASKIN2Q8WXE0 1202 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 CCDC74BQ96LY2 380 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 CATSPER2Q96P56 530 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 HSD3B7Q9H2F3 369 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 NOL6Q9H6R4 1146 aaKnown RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 SPATS2LQ9NUQ6 558 aaKnown RBP17.4■□□□□ 0.38
RETREG3-210ENST00000590541 NBASA2RRP1 2371 aa17.4■□□□□ 0.38
RETREG3-210ENST00000590541 ZSCAN5CA6NGD5 496 aaPredicted RBP17.39■□□□□ 0.37
RETREG3-210ENST00000590541 ZNF891A8MT65 544 aaPredicted RBP17.39■□□□□ 0.37
RETREG3-210ENST00000590541 CALB1P05937 261 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 CD1CP29017 333 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 ALDH4A1P30038 563 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 SDC4P31431 198 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 MMP12P39900 470 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 PTPN9P43378 593 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 ANO6Q4KMQ2 910 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 FILIP1LQ4L180 1135 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 HIST2H2BCQ6DN03 193 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 STRADAQ7RTN6 431 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 ZSWIM9Q86XI8 627 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 PHF13Q86YI8 300 aaPredicted RBP17.39■□□□□ 0.37
RETREG3-210ENST00000590541 CACNA2D3Q8IZS8 1091 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 EMC1Q8N766 993 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 EXOC2Q96KP1 924 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 SUV39H2Q9H5I1 410 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 METTL5Q9NRN9 209 aaKnown RBP17.39■□□□□ 0.37
RETREG3-210ENST00000590541 LHX3Q9UBR4 397 aa17.39■□□□□ 0.37
RETREG3-210ENST00000590541 CACNB4O00305 520 aaPredicted RBP17.38■□□□□ 0.37
RETREG3-210ENST00000590541 TNFRSF10CO14798 259 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 NKX2-8O15522 239 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 DUX1O43812 170 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 RAD1O60671 282 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 PRKCGP05129 697 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 FERP16591 822 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 LIMK2P53671 638 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 CYTH1Q15438 398 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 CLPPQ16740 277 aaPredicted RBP17.38■□□□□ 0.37
RETREG3-210ENST00000590541 CDO1Q16878 200 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 CLEC16AQ2KHT3 1053 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 C15orf59Q2T9L4 293 aaPredicted RBP17.38■□□□□ 0.37
RETREG3-210ENST00000590541 ZNF354CQ86Y25 554 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 NRROSQ86YC3 692 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 KIAA1524Q8TCG1 905 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 ART4Q93070 314 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 MIB2Q96AX9 1013 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 TBC1D31Q96DN5 1066 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 ABHD17AQ96GS6 310 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 SLC45A3Q96JT2 553 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 C11orf70Q9BRQ4 267 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 DDA1Q9BW61 102 aa17.38■□□□□ 0.37
RETREG3-210ENST00000590541 LGR4Q9BXB1 951 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms