RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TRIP6Q15654 476 aaKnown RBP11.29□□□□□ -0.6
SMAD4-211ENST00000590499 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 OXR1Q8N573 874 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 PLD5Q8N7P1 536 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 OR13H1Q8NG92 308 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 CENPTQ96BT3 561 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 KLHDC7BQ96G42 594 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 TSGA13Q96PP4 275 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 RNF157Q96PX1 679 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 NUDCD1Q96RS6 583 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 PCDH12Q9NPG4 1184 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 TFR2Q9UP52 801 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 REXO2Q9Y3B8 237 aaKnown RBP11.29□□□□□ -0.6
SMAD4-211ENST00000590499 PCDHA13Q9Y5I0 950 aa11.29□□□□□ -0.6
SMAD4-211ENST00000590499 PTPRBP23467 1997 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 KNTC1P50748 2209 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-211ENST00000590499 LRRD1A4D1F6 860 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 A6NNZ2 444 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 MMP20O60882 483 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 DKK1O94907 266 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 NDUFA10O95299 355 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 COMTP21964 271 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 CDC25BP30305 580 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 CYLC1P35663 651 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-211ENST00000590499 GRK6P43250 576 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 MMP13P45452 471 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 ARRB1P49407 418 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-211ENST00000590499 SCNN1BP51168 640 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 SNRPNP63162 240 aaKnown RBP11.28□□□□□ -0.6
SMAD4-211ENST00000590499 BCL2L1Q07817 233 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 ELP6Q0PNE2 266 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 RALGDSQ12967 914 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 TAZQ16635 292 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 RALGPS1Q5JS13 557 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 MARC1Q5VT66 337 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 ALG1LQ6GMV1 187 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 RAD9BQ6WBX8 426 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 KDM7AQ6ZMT4 941 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 GATAD2AQ86YP4 633 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 TMTC1Q8IUR5 882 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 TMEM139Q8IV31 216 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 TP53I13Q8NBR0 393 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-211ENST00000590499 SETD7Q8WTS6 366 aaKnown RBP11.28□□□□□ -0.6
SMAD4-211ENST00000590499 HDAC11Q96DB2 347 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 NOD2Q9HC29 1040 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 DTLQ9NZJ0 730 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 SALL4Q9UJQ4 1053 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 ATP8A1Q9Y2Q0 1164 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 HYOU1Q9Y4L1 999 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-211ENST00000590499 LRP4O75096 1905 aa11.28□□□□□ -0.6
SMAD4-211ENST00000590499 USP24Q9UPU5 2620 aa11.27□□□□□ -0.6
SMAD4-211ENST00000590499 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-211ENST00000590499 MATN3O15232 486 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 OIP5O43482 229 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 PSTPIP1O43586 416 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 SOCS5O75159 536 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 TM7SF2O76062 418 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 KRT1P04264 644 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 PRKCGP05129 697 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 FTH1P19P0C7X4 201 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 CCNCP24863 283 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 IGFALSP35858 605 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 PFN3P60673 137 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 MAXP61244 160 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 TRAF2Q12933 501 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 BNIP3Q12983 259 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 SGCGQ13326 291 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 FZD2Q14332 565 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 IHHQ14623 411 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 TLR1Q15399 786 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 SPA17Q15506 151 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 IFI16Q16666 785 aaKnown RBP11.27□□□□□ -0.61
SMAD4-211ENST00000590499 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 TPRG1LQ5T0D9 272 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 TIGD7Q6NT04 549 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-211ENST00000590499 C11orf63Q6NUN7 778 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 Q6ZSR6 202 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 PTAR1Q7Z6K3 402 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-211ENST00000590499 DCP2Q8IU60 420 aaKnown RBP11.27□□□□□ -0.61
SMAD4-211ENST00000590499 RHOT1Q8IXI2 618 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 BBS5Q8N3I7 341 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 CXorf40AQ8TE69 158 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 NSMCE1Q8WV22 266 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 IFT43Q96FT9 208 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 POM121Q96HA1 1249 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 CDC6Q99741 560 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 WRAP53Q9BUR4 548 aaKnown RBP11.27□□□□□ -0.61
SMAD4-211ENST00000590499 GOLPH3Q9H4A6 298 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 CAAP1Q9H8G2 361 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 ANGPTL2Q9UKU9 493 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 ALG6Q9Y672 507 aa11.27□□□□□ -0.61
SMAD4-211ENST00000590499 SPTY2D1-AS1A0A0U1RR47 76 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 CFAP69A5D8W1 941 aa11.26□□□□□ -0.61
SMAD4-211ENST00000590499 BTNL10A8MVZ5 291 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms