RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 CDRT15L2A8MXV6 281 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 ERVH48-1M5A8F1 160 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 PDE2AO00408 941 aaPredicted RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 TRAFD1O14545 582 aaPredicted RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 RPLP0P05388 317 aaKnown RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 HOXC4P09017 264 aaPredicted RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 SKILP12757 684 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 NFKBIAP25963 317 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 HSPA9P38646 679 aaKnown RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 CCL7P80098 99 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 RHDQ02161 417 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 SLC10A7Q0GE19 358 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 BOLA3Q53S33 107 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 TAF1BQ53T94 588 aaPredicted RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 E4F1Q66K89 784 aaPredicted RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 TMCO3Q6UWJ1 677 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 BBS5Q8N3I7 341 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 FAM46DQ8NEK8 389 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 PDCD6IPQ8WUM4 868 aaKnown RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 HSPH1Q92598 858 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 LIN37Q96GY3 246 aaPredicted RBP18■□□□□ 0.47
PRKCSH-211ENST00000590098 WDR26Q9H7D7 661 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 FGF22Q9HCT0 170 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 RABGEF1Q9UJ41 708 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 MOSPD1Q9UJG1 213 aa18■□□□□ 0.47
PRKCSH-211ENST00000590098 ARHGEF17Q96PE2 2063 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 A0A1B0GTH6 734 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 TNFRSF10CO14798 259 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 SOCS5O75159 536 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 ZIC2O95409 532 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 SERPINC1P01008 464 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 ITGA2BP08514 1039 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 TRIM23P36406 574 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 ZNF165P49910 485 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 PDX1P52945 283 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 INHBCP55103 352 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 VAC14Q08AM6 782 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 EIF3IQ13347 325 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 DPYSL2Q16555 572 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 SMTNL2Q2TAL5 461 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 PNCKQ6P2M8 343 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 CLEC14AQ86T13 490 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 TP53INP2Q8IXH6 220 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 FBXO39Q8N4B4 442 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 GPR156Q8NFN8 814 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 NSMCE1Q8WV22 266 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 NAP1L5Q96NT1 182 aaPredicted RBP17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 ISCUQ9H1K1 167 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 LRRN3Q9H3W5 708 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 CYP4F12Q9HCS2 524 aa17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 MRPL40Q9NQ50 206 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.99■□□□□ 0.47
PRKCSH-211ENST00000590098 TTC24A2A3L6 582 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 D6RAR5 112 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 PLD2O14939 933 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 GLB1P16278 677 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 AMPD1P23109 780 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 SKOR1P84550 965 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 PIGHQ14442 188 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 TSR1Q2NL82 804 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 KCTD16Q68DU8 428 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 OGFOD3Q6PK18 319 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 RAB11FIP2Q7L804 512 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 POLNQ7Z5Q5 900 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 B3GNT8Q7Z7M8 397 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 CCNJLQ8IV13 435 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 Q8N9G6 341 aaPredicted RBP17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 NUS1Q96E22 293 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 TMEM74Q96NL1 305 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 NUDCD1Q96RS6 583 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 FOXP3Q9BZS1 431 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 TMEM168Q9H0V1 697 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 DPEP2Q9H4A9 486 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 KCTD5Q9NXV2 234 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 B4GALT6Q9UBX8 382 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 APPL1Q9UKG1 709 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 PCDHGC4Q9Y5F7 938 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 ZNF462Q96JM2 2506 aa17.98■□□□□ 0.47
PRKCSH-211ENST00000590098 PIEZO2Q9H5I5 2752 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 A0A1W2PQM1 296 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 CAPN8A6NHC0 703 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 CPP00450 1065 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 PNLIPP16233 465 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 GM2AP17900 193 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 IL1R2P27930 398 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 VIPR1P32241 457 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 CFHR1Q03591 330 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 ARHGEF7Q14155 803 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 NR1I3Q14994 352 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 TDRD12Q587J7 1177 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 CERCAMQ5T4B2 595 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 DENND2CQ68D51 928 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 ATPAF2Q8N5M1 289 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 SPOCK2Q92563 424 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 WBP1Q96G27 269 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 COQ10AQ96MF6 247 aa17.97■□□□□ 0.47
PRKCSH-211ENST00000590098 NSMCE3Q96MG7 304 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms