RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-210	ENST00000589990	FAM129C	Q86XR2	697 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NRSN1	Q8IZ57	195 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ZDHHC1	Q8WTX9	485 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	DDA1	Q9BW61	102 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MAGEH1	Q9H213	219 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	APMAP	Q9HDC9	416 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TMEM248	Q9NWD8	314 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	OR12D3	Q9UGF7	316 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TMEM59L	Q9UK28	342 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MFHAS1	Q9Y4C4	1052 aa		12.82	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TNRC6A	Q8NDV7	1962 aa	Known RBP	12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	IGHV1OR21-1	A0A087WYE8	117 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CXorf51A	A0A1B0GTR3	108 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TSPAN11	A1L157	253 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PRSS38	A1L453	326 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	GOLGA6L4	A6NEF3	574 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990		A8MX80	341 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	FOXN3	O00409	490 aa	Predicted RBP	12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PDGFA	P04085	211 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	FURIN	P09958	794 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RHOQ	P17081	205 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	F8A1	P23610	371 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	KRT9	P35527	623 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RGR	P47804	291 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	GABRB2	P47870	512 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MAPKAPK2	P49137	400 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	GEMIN4	P57678	1058 aa	Known RBP	12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ELP6	Q0PNE2	266 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CDO1	Q16878	200 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ENOSF1	Q7L5Y1	443 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ZNF354C	Q86Y25	554 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CAMK1D	Q8IU85	385 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NAGS	Q8N159	534 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CCDC185	Q8N715	623 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	AGBL5	Q8NDL9	886 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ATL2	Q8NHH9	583 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	APOBEC4	Q8WW27	367 aa	Known RBP	12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	STARD8	Q92502	1023 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RTP4	Q96DX8	246 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CARS2	Q9HA77	564 aa	Known RBP	12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SIX2	Q9NPC8	291 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TAAR2	Q9P1P5	351 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	APEX2	Q9UBZ4	518 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	HPCAL4	Q9UM19	191 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PLEKHM1	Q9Y4G2	1056 aa		12.81	□□□□□ -0.36
PRKCSH-210	ENST00000589990	HIVEP3	Q5T1R4	2406 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990		A8MU76	341 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CACNB4	O00305	520 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TEX33	O43247	280 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SMC2	O95347	1197 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CCNB1	P14635	433 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CSTF2	P33240	577 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ADRA1B	P35368	520 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ETFB	P38117	255 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MARS	P56192	900 aa	Known RBP	12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PTK2	Q05397	1052 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SLC30A9	Q6PML9	568 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TMEM135	Q86UB9	458 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ZDHHC17	Q8IUH5	632 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NLGN4X	Q8N0W4	816 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PYROXD2	Q8N2H3	581 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	OR4D9	Q8NGE8	314 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	KIAA1524	Q8TCG1	905 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	C18orf8	Q96DM3	657 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NSMCE3	Q96MG7	304 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SUV39H2	Q9H5I1	410 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ATP8A1	Q9Y2Q0	1164 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	KCNMB2	Q9Y691	235 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	MED13	Q9UHV7	2174 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SHANK1	Q9Y566	2161 aa		12.8	□□□□□ -0.36
PRKCSH-210	ENST00000589990		B4E171	279 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TNFRSF10C	O14798	259 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PON1	P27169	355 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CDH5	P33151	784 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TRIM23	P36406	574 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TSPAN7	P41732	249 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	GNPDA1	P46926	289 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	POLD2	P49005	469 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NRG1	Q02297	640 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	RAD51	Q06609	339 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	STIM1	Q13586	685 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SNAP47	Q5SQN1	464 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	DCAF12	Q5T6F0	453 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TAF3	Q5VWG9	929 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	LIPI	Q6XZB0	460 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TEX19	Q8NA77	164 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SSC4D	Q8WTU2	575 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	NCAPG	Q9BPX3	1015 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ASPSCR1	Q9BZE9	553 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	METTL5	Q9NRN9	209 aa	Known RBP	12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	SRPK3	Q9UPE1	567 aa		12.79	□□□□□ -0.36
PRKCSH-210	ENST00000589990	OTOG	Q6ZRI0	2925 aa		12.78	□□□□□ -0.36
PRKCSH-210	ENST00000589990	ZNF106	Q9H2Y7	1883 aa	Known RBP	12.78	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TRBV23OR9-2	A0A075B6M9	112 aa		12.78	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CAPN5	O15484	640 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKCSH-210	ENST00000589990	CEACAM5	P06731	702 aa		12.78	□□□□□ -0.36
PRKCSH-210	ENST00000589990	PLEK	P08567	350 aa	Predicted RBP	12.78	□□□□□ -0.36
PRKCSH-210	ENST00000589990	TCN2	P20062	427 aa		12.78	□□□□□ -0.36

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