RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 SLC2A6Q9UGQ3 507 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 FAM169AQ9Y6X4 670 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 KANSL1LA0AUZ9 987 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 CCT5P48643 541 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 COPAP53621 1224 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 SATB1Q01826 763 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 SMAD1Q15797 465 aaKnown RBP24.82■■□□□ 1.56
RFX1-205ENST00000589239 ANKRD20A4Q4UJ75 823 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 TTC7BQ86TV6 843 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 UNC5BQ8IZJ1 945 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 PTCD2Q8WV60 388 aaKnown RBP24.82■■□□□ 1.56
RFX1-205ENST00000589239 ARRDC3Q96B67 414 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 SCRN2Q96FV2 425 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 MKRN2Q9H000 416 aaKnown RBP24.82■■□□□ 1.56
RFX1-205ENST00000589239 LMAN1LQ9HAT1 526 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 MAGEE1Q9HCI5 957 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 MRPS17Q9Y2R5 130 aaKnown RBP24.82■■□□□ 1.56
RFX1-205ENST00000589239 PPIL1Q9Y3C6 166 aa24.82■■□□□ 1.56
RFX1-205ENST00000589239 TCRBV9S1A1TA0A576 114 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 MROH6A6NGR9 719 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 NPIPB15A6NHN6 443 aaPredicted RBP24.81■■□□□ 1.56
RFX1-205ENST00000589239 C1QTNF3-AMACRE9PGA6 284 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 PLK4O00444 970 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 USP1O94782 785 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 SHBGP04278 402 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 TIMP2P16035 220 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 PTPRCAPQ14761 206 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 STEAP4Q687X5 459 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 ESRP1Q6NXG1 681 aaKnown RBP24.81■■□□□ 1.56
RFX1-205ENST00000589239 OR2W6PQ8NHA6 318 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 GSDMBQ8TAX9 411 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 MRM3Q9HC36 420 aaKnown RBP24.81■■□□□ 1.56
RFX1-205ENST00000589239 IL1RAPL1Q9NZN1 696 aa24.81■■□□□ 1.56
RFX1-205ENST00000589239 ZCWPW2A0A1B0GU75 182 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 CAPN8A6NHC0 703 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 PIAS1O75925 651 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 ITGB7P26010 798 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 TRMT10BQ6PF06 316 aaKnown RBP24.8■■□□□ 1.56
RFX1-205ENST00000589239 USP45Q70EL2 814 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 NDUFAF2Q8N183 169 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 OR2T3Q8NH03 318 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 HCAR2Q8TDS4 363 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 ZNF711Q9Y462 761 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 FAM170BA6NMN3 283 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 LYSMD3Q7Z3D4 306 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 TSPAN33Q86UF1 283 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 FBF1Q8TES7 1133 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 PPP1R16AQ96I34 528 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 MCCC1Q96RQ3 725 aaPredicted RBP24.8■■□□□ 1.56
RFX1-205ENST00000589239 SLC6A17Q9H1V8 727 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 CD248Q9HCU0 757 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 TREX1Q9NSU2 369 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 PLAAQ9Y263 795 aa24.8■■□□□ 1.56
RFX1-205ENST00000589239 C1orf232A0A0U1RR37 186 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 UPK3BL1B0FP48 263 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 UPK3BL2E5RIL1 263 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 RNASEH1O60930 286 aaKnown RBP24.79■■□□□ 1.56
RFX1-205ENST00000589239 CRTAMO95727 393 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 TSHRP16473 764 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 PHBP35232 272 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 FZD5Q13467 585 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 TAF1AQ15573 450 aaPredicted RBP24.79■■□□□ 1.56
RFX1-205ENST00000589239 CST6Q15828 149 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 CNGA3Q16281 694 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 SPANXN3Q5MJ09 141 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 EOGTQ5NDL2 527 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 TSTD2Q5T7W7 516 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 TMEM92Q6UXU6 159 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 IQCKQ8N0W5 287 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 EID2BQ96D98 161 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 LYSMD1Q96S90 227 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 PCDH12Q9NPG4 1184 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 HACD3Q9P035 362 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 B4GALT6Q9UBX8 382 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 MMP17Q9ULZ9 603 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 MID1O15344 667 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 SPAG6O75602 509 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 ABHD2P08910 425 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 LIG3P49916 1009 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 CDKN3Q16667 212 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 HSF5Q4G112 596 aaPredicted RBP24.79■■□□□ 1.56
RFX1-205ENST00000589239 FAM46CQ5VWP2 391 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 TTC30BQ8N4P2 665 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.79■■□□□ 1.56
RFX1-205ENST00000589239 OR13C4Q8NGS5 318 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 OR13J1Q8NGT2 312 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 ZIM3Q96PE6 472 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 ATXN2Q99700 1313 aaKnown RBP24.79■■□□□ 1.56
RFX1-205ENST00000589239 GPR63Q9BZJ6 419 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 DYRK4Q9NR20 520 aa24.79■■□□□ 1.56
RFX1-205ENST00000589239 CCL22O00626 93 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 CLDN7O95471 211 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 NUDT17P0C025 328 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 XPAP23025 273 aaPredicted RBP24.78■■□□□ 1.56
RFX1-205ENST00000589239 TMPRSS15P98073 1019 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 LRRC32Q14392 662 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 CRTC1Q6UUV9 634 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 MICALCLQ6ZW33 695 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 TMPRSS6Q8IU80 811 aa24.78■■□□□ 1.56
RFX1-205ENST00000589239 DNAJC1Q96KC8 554 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms