RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 TCAF1Q9Y4C2 921 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 LRATO95237 230 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 GPC1P35052 558 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 CHI3L1P36222 383 aaPredicted RBP12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 AIF1P55008 147 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 TCEAL1Q15170 157 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 CCL14Q16627 93 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 ZYG11AQ6WRX3 759 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 CYP2S1Q96SQ9 504 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 EPB41L4BQ9H329 900 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 CAPN10Q9HC96 672 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 DNAJC28Q9NX36 388 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 LEF1Q9UJU2 399 aaPredicted RBP12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 ATP11BQ9Y2G3 1177 aa12.1□□□□□ -0.47
PRKAR1A-217ENST00000589228 FAM159BA6NKW6 160 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 AHCYL1O43865 530 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ATG7O95352 703 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TYMPP19971 482 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 RAP1GDS1P52306 607 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 NR1H2P55055 460 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 RUNX1T1Q06455 604 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ARHGAP36Q6ZRI8 547 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 RPS27LQ71UM5 84 aaKnown RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TREML1Q86YW5 311 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 LRRC49Q8IUZ0 686 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 KBTBD2Q8IY47 623 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 BPIFB6Q8NFQ5 453 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 MCOLN3Q8TDD5 553 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TMEM159Q96B96 161 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 PRR11Q96HE9 360 aaPredicted RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 GPR21Q99679 349 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 SYT11Q9BT88 431 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 IGSF9Q9P2J2 1179 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 SNX8Q9Y5X2 465 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 RGS14O43566 566 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 FGF1P05230 155 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 VAV1P15498 845 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 MAPK1P28482 360 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 SERPINB1P30740 379 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 SLC1A2P43004 574 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 IRF8Q02556 426 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ACSM2AQ08AH3 577 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 AP5B1Q2VPB7 878 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 DEPDC1Q5TB30 811 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ACSM2BQ68CK6 577 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 CDCA2Q69YH5 1023 aaPredicted RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ELMSAN1Q6PJG2 1045 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 PAOXQ6QHF9 649 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 FRMD7Q6ZUT3 714 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TRMT11Q7Z4G4 463 aaKnown RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 FAM228AQ86W67 206 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 C19orf60Q96EN9 201 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 HMCESQ96FZ2 354 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 MAGED4Q96JG8 741 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 SPATA16Q9BXB7 569 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 IRS2Q9Y4H2 1338 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TBL1XO60907 577 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 WDR47O94967 919 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ALOX15P16050 662 aaPredicted RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 CCNCP24863 283 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 CCR10P46092 362 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 RFX3P48380 749 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TTPAP49638 278 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 NEK2P51955 445 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ADARP55265 1226 aaKnown RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 SLC18A2Q05940 514 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 CSTF3Q12996 717 aaKnown RBP12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 B3GNT9Q6UX72 402 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 CRYBG2Q8N1P7 616 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 PLEKHA8Q96JA3 519 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TEX12Q9BXU0 123 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 TXLNGYQ9BZA5 131 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 OSGEPL1Q9H4B0 414 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 ARMC7Q9H6L4 198 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 EBF2Q9HAK2 575 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 PRKAG3Q9UGI9 489 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 SLC25A13Q9UJS0 675 aa12.09□□□□□ -0.47
PRKAR1A-217ENST00000589228 NPEPPSL1A6NEC2 478 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 UBXN8O00124 270 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 HNRNPRO43390 633 aaKnown RBP12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 SPATA31D3P0C874 917 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 EMC10Q5UCC4 262 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 SPATA31D4Q6ZUB0 917 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 OSTM1Q86WC4 334 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 UBR7Q8N806 425 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 UGT2B28Q9BY64 529 aa12.08□□□□□ -0.47
PRKAR1A-217ENST00000589228 SF3B1O75533 1304 aaKnown RBP eCLIP12.08□□□□□ -0.485e-6■■■■■ 80.4
PRKAR1A-217ENST00000589228 SMIM31A0A1B0GVY4 71 aa12.08□□□□□ -0.48
PRKAR1A-217ENST00000589228 FZD9O00144 591 aa12.08□□□□□ -0.48
PRKAR1A-217ENST00000589228 MATN3O15232 486 aa12.08□□□□□ -0.48
PRKAR1A-217ENST00000589228 DLDP09622 509 aaKnown RBP12.08□□□□□ -0.48
PRKAR1A-217ENST00000589228 TJAP1Q5JTD0 557 aa12.08□□□□□ -0.48
PRKAR1A-217ENST00000589228 AFTPHQ6ULP2 937 aa12.08□□□□□ -0.48
PRKAR1A-217ENST00000589228 SYT12Q8IV01 421 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms