RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ERVW-1Q9UQF0 538 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 KIAA1549LQ6ZVL6 1849 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 GLRA3O75311 464 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 POP4O95707 220 aaKnown RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 AHSGP02765 367 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 MPOP05164 745 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 ATP5BP06576 529 aaKnown RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 DHRS4L1P0CG22 281 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 POU3F3P20264 500 aaPredicted RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 OGNP20774 298 aaKnown RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 ETV4P43268 484 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 LEPRP48357 1165 aaKnown RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 ARSDP51689 593 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 FOXK2Q01167 660 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 DLG2Q15700 870 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 PDK4Q16654 411 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 GEN1Q17RS7 908 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 INSCQ1MX18 579 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 MYLK3Q32MK0 819 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CARD16Q5EG05 197 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 LCA5Q86VQ0 697 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CAMK1DQ8IU85 385 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CILP2Q8IUL8 1156 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 MFSD6LQ8IWD5 586 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 DENND6AQ8IWF6 608 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 RYBPQ8N488 228 aaPredicted RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 NAT16Q8N8M0 369 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 MDGA1Q8NFP4 955 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 OR6P1Q8NGX9 317 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 GDAP1Q8TB36 358 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 PIH1D2Q8WWB5 315 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 ZNF641Q96N77 438 aaPredicted RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 S1PR5Q9H228 398 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 VPS11Q9H270 941 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CLEC1BQ9P126 229 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 CORO1CQ9ULV4 474 aaPredicted RBP12.1□□□□□ -0.47
CCBE1-203ENST00000589116 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 KCTD3Q9Y597 815 aa12.1□□□□□ -0.47
CCBE1-203ENST00000589116 WASH3PC4AMC7 463 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 NDUFAB1O14561 156 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 TULP3O75386 442 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 GSTA1P08263 222 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 PIRTP0C851 137 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 ARSAP15289 507 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 MTHFRP42898 656 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 RECQLP46063 649 aaPredicted RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 CLCN5P51795 746 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 CCNHP51946 323 aaPredicted RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 SEC24CP53992 1094 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 MPP1Q00013 466 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 CTBP1Q13363 440 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 PDE1CQ14123 709 aaPredicted RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 EIF4HQ15056 248 aaKnown RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 CTC1Q2NKJ3 1217 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 ACCSLQ4AC99 568 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 TMEM215Q68D42 235 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 MRNIPQ6NTE8 343 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 AFTPHQ6ULP2 937 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 VITQ6UXI7 678 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 KYAT3Q6YP21 454 aaKnown RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 GJD3Q8N144 294 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 TTC30BQ8N4P2 665 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 CPA6Q8N4T0 437 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 OR13C4Q8NGS5 318 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 OR6K2Q8NGY2 324 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 ECHDC3Q96DC8 303 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 CDKN2AIPNLQ96HQ2 116 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 TBATAQ96M53 351 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 NSRP1Q9H0G5 558 aaKnown RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 EBF3Q9H4W6 596 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 ECT2Q9H8V3 914 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 SLC17A7Q9P2U7 560 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 HECAQ9UBI9 543 aaPredicted RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 DCDC2Q9UHG0 476 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 CDH22Q9UJ99 828 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 GRID1Q9ULK0 1009 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 MTO1Q9Y2Z2 717 aaKnown RBP12.09□□□□□ -0.47
CCBE1-203ENST00000589116 ZNF711Q9Y462 761 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
CCBE1-203ENST00000589116 PRRC2BQ5JSZ5 2229 aaKnown RBP12.08□□□□□ -0.48
CCBE1-203ENST00000589116 A0A0J9YYE9 177 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 CCDC162PA2VCL2 907 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 CAPN8A6NHC0 703 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 H7C0S8 307 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 TBX10O75333 385 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 PIGNO95427 931 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 GOT2P00505 430 aaKnown RBP12.08□□□□□ -0.48
CCBE1-203ENST00000589116 TRBC1P01850 177 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 GABRB3P28472 473 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 SLC8A1P32418 973 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 CSRP3P50461 194 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 DBN1Q16643 649 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 GAB4Q2WGN9 574 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 TANGO2Q6ICL3 276 aa12.08□□□□□ -0.48
CCBE1-203ENST00000589116 PTAR1Q7Z6K3 402 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms