RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 B4GALNT1Q00973 533 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 NFATC3Q12968 1075 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 SPECC1LQ69YQ0 1117 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 ARHGAP36Q6ZRI8 547 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 ZNF438Q7Z4V0 828 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 SRLQ86TD4 932 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 VASH2Q86V25 355 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 ARFGAP1Q8N6T3 406 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 EXTL1Q92935 676 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 TMEM159Q96B96 161 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 PEBP4Q96S96 227 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 SYT11Q9BT88 431 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 ATP13A3Q9H7F0 1226 aa18.49■□□□□ 0.55
CCDC43-204ENST00000588687 B4DGG1 531 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-204ENST00000588687 CACNB4O00305 520 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-204ENST00000588687 ELFN1P0C7U0 828 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 ARSDP51689 593 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 NR1D2Q14995 579 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 C16orf72Q14CZ0 275 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 SYCP1Q15431 976 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 TAF8Q7Z7C8 310 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 ZFAND4Q86XD8 727 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 NRROSQ86YC3 692 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 FAM46DQ8NEK8 389 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 HTR3CQ8WXA8 447 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 SEMA6CQ9H3T2 930 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 LRIT1Q9P2V4 623 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 AP4E1Q9UPM8 1137 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 GTF3C3Q9Y5Q9 886 aa18.48■□□□□ 0.55
CCDC43-204ENST00000588687 PRSS38A1L453 326 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 FUCA1P04066 466 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 KCNC4Q03721 635 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 FKBP15Q5T1M5 1219 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 CFAP58Q5T655 872 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 XKR5Q6UX68 686 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 USP53Q70EK8 1073 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 PRICKLE2Q7Z3G6 844 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 MCOLN2Q8IZK6 566 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 COQ10AQ96MF6 247 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 AGPAT1Q99943 283 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 WDR26Q9H7D7 661 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 ST14Q9Y5Y6 855 aa18.47■□□□□ 0.55
CCDC43-204ENST00000588687 A0A1W2PQC6 194 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 ARHGAP42A6NI28 874 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 LGALS16A8MUM7 142 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 AGRPO00253 132 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 B4GAT1O43505 415 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 FAM87AP0C7U9 286 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 KELP23276 732 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 CSRP3P50461 194 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 COPB1P53618 953 aaKnown RBP18.46■□□□□ 0.55
CCDC43-204ENST00000588687 MAZP56270 477 aaKnown RBP18.46■□□□□ 0.55
CCDC43-204ENST00000588687 PNCKQ6P2M8 343 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 APTXQ7Z2E3 356 aaKnown RBP18.46■□□□□ 0.55
CCDC43-204ENST00000588687 TP53INP2Q8IXH6 220 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 GPBAR1Q8TDU6 330 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 PTCD2Q8WV60 388 aaKnown RBP18.46■□□□□ 0.55
CCDC43-204ENST00000588687 USP7Q93009 1102 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 KCTD15Q96SI1 283 aaPredicted RBP18.46■□□□□ 0.55
CCDC43-204ENST00000588687 CMKLR1Q99788 373 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 FUCA2Q9BTY2 467 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 SNRNP25Q9BV90 132 aaKnown RBP18.46■□□□□ 0.55
CCDC43-204ENST00000588687 TRIM4Q9C037 500 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 B3GNT4Q9C0J1 378 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 RDH14Q9HBH5 336 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 CYP4F12Q9HCS2 524 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 SPATS2LQ9NUQ6 558 aaKnown RBP18.46■□□□□ 0.55
CCDC43-204ENST00000588687 FANCLQ9NW38 375 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 TAS2R14Q9NYV8 317 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 B4GALT6Q9UBX8 382 aa18.46■□□□□ 0.55
CCDC43-204ENST00000588687 EIF3CLB5ME19 914 aaKnown RBP18.45■□□□□ 0.54
CCDC43-204ENST00000588687 EEF2KO00418 725 aaKnown RBP18.45■□□□□ 0.54
CCDC43-204ENST00000588687 PALMO75781 387 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 MYCLP1P12525 358 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-204ENST00000588687 NFKB2Q00653 900 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 BCL2L1Q07817 233 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 NSUN2Q08J23 767 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC43-204ENST00000588687 MAMLD1Q13495 774 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 CNGA3Q16281 694 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 ZNF574Q6ZN55 896 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-204ENST00000588687 RFX8Q6ZV50 586 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 PMEPA1Q969W9 287 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 PSKH2Q96QS6 385 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 ERGIC2Q96RQ1 377 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 EIF3CQ99613 913 aaKnown RBP18.45■□□□□ 0.54
CCDC43-204ENST00000588687 NUDT22Q9BRQ3 303 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 FRMD8Q9BZ67 464 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-204ENST00000588687 DPEP2Q9H4A9 486 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 DONSONQ9NYP3 566 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 LRRK2Q5S007 2527 aa18.45■□□□□ 0.54
CCDC43-204ENST00000588687 ANKRD62A6NC57 917 aa18.44■□□□□ 0.54
CCDC43-204ENST00000588687 HTRA2O43464 458 aaPredicted RBP18.44■□□□□ 0.54
CCDC43-204ENST00000588687 CPNE6O95741 557 aa18.44■□□□□ 0.54
CCDC43-204ENST00000588687 PEX11BO96011 259 aa18.44■□□□□ 0.54
CCDC43-204ENST00000588687 FGF1P05230 155 aa18.44■□□□□ 0.54
CCDC43-204ENST00000588687 CEACAM5P06731 702 aa18.44■□□□□ 0.54
CCDC43-204ENST00000588687 CCL4P13236 92 aa18.44■□□□□ 0.54
CCDC43-204ENST00000588687 CCNB1P14635 433 aa18.44■□□□□ 0.54
CCDC43-204ENST00000588687 ERCC2P18074 760 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms