RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TRIM7Q9C029 511 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 ZMYND15Q9H091 742 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 TMEM168Q9H0V1 697 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 WDR26Q9H7D7 661 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 RNF215Q9Y6U7 377 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 CAPN8A6NHC0 703 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 J3QKU1 62 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 CPP00450 1065 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 MIPP30301 263 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 MLLT3P42568 568 aaPredicted RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 PPM1FP49593 454 aaPredicted RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 MAZP56270 477 aaKnown RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 SKOR1P84550 965 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 IL10RBQ08334 325 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 EIF3IQ13347 325 aaKnown RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 BIRC2Q13490 618 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 LBRQ14739 615 aaKnown RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 SMTNL2Q2TAL5 461 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 AMZ1Q400G9 498 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 C14orf28Q4W4Y0 310 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 SPECC1LQ69YQ0 1117 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 RBM43Q6ZSC3 357 aaKnown RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 DPPA4Q7L190 304 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 PELI3Q8N2H9 469 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 OR6C4Q8NGE1 309 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 HSPH1Q92598 858 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 GBP4Q96PP9 640 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 LGR4Q9BXB1 951 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 CARS2Q9HA77 564 aaKnown RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 LRIT1Q9P2V4 623 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 B4GALT6Q9UBX8 382 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 CNOT8Q9UFF9 292 aaKnown RBP13.75□□□□□ -0.21
HDAC5-208ENST00000588419 DGKBQ9Y6T7 804 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 ATMQ13315 3056 aa13.75□□□□□ -0.21
HDAC5-208ENST00000588419 SDK2Q58EX2 2172 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 PRSS38A1L453 326 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 TMX2-CTNND1H3BSU7 103 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 NOBOXO60393 691 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 GLB1P16278 677 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 ANP32AP39687 249 aaKnown RBP13.74□□□□□ -0.21
HDAC5-208ENST00000588419 CSNK1DP48730 415 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 AP1S1P61966 158 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 POLR2LP62875 67 aaKnown RBP13.74□□□□□ -0.21
HDAC5-208ENST00000588419 AGERQ15109 404 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 CERCAMQ5T4B2 595 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 TMCO4Q5TGY1 634 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 PPP1R2P3Q6NXS1 205 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 DOK6Q6PKX4 331 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 PRICKLE2Q7Z3G6 844 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 SPRED1Q7Z699 444 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 VASH2Q86V25 355 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 ARFGAP1Q8N6T3 406 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 GPR156Q8NFN8 814 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 ECHDC3Q96DC8 303 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 HAUS4Q9H6D7 363 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 ZWILCHQ9H900 591 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 SEPT3Q9UH03 358 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 PCDHGC4Q9Y5F7 938 aa13.74□□□□□ -0.21
HDAC5-208ENST00000588419 PRAMEF33A0A0G2JMD5 474 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 EIF3CLB5ME19 914 aaKnown RBP13.73□□□□□ -0.21
HDAC5-208ENST00000588419 H3BRJ5 948 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 SLC28A2O43868 658 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 PRAMEF10O60809 474 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 GM2AP17900 193 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 CCKBRP32239 447 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 ARL4AP40617 200 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 ETV5P41161 510 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 GNPDA1P46926 289 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 RENBPP51606 427 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 MAXP61244 160 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 SLC10A7Q0GE19 358 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
HDAC5-208ENST00000588419 NCAPHQ15003 741 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 CNGA3Q16281 694 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 PLEKHA7Q6IQ23 1121 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 PNCKQ6P2M8 343 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 USP53Q70EK8 1073 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
HDAC5-208ENST00000588419 IRF2BP2Q7Z5L9 587 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 HEATR4Q86WZ0 1026 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 KIAA1524Q8TCG1 905 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 WBP1Q96G27 269 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 NSMCE3Q96MG7 304 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 EIF3CQ99613 913 aaKnown RBP13.73□□□□□ -0.21
HDAC5-208ENST00000588419 ARHGAP9Q9BRR9 750 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 HSD3B7Q9H2F3 369 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 RDH14Q9HBH5 336 aa13.73□□□□□ -0.21
HDAC5-208ENST00000588419 PHPT1Q9NRX4 125 aaPredicted RBP13.73□□□□□ -0.21
HDAC5-208ENST00000588419 CWC15Q9P013 229 aaKnown RBP13.73□□□□□ -0.21
HDAC5-208ENST00000588419 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
HDAC5-208ENST00000588419 CFAP69A5D8W1 941 aa13.72□□□□□ -0.21
HDAC5-208ENST00000588419 TMEM191CA6NGB0 347 aa13.72□□□□□ -0.21
HDAC5-208ENST00000588419 RHPN2P1A8MT19 583 aa13.72□□□□□ -0.21
HDAC5-208ENST00000588419 GOLGA6L22H0YM25 854 aa13.72□□□□□ -0.21
HDAC5-208ENST00000588419 TRAFD1O14545 582 aaPredicted RBP13.72□□□□□ -0.21
HDAC5-208ENST00000588419 LRCH4O75427 683 aa13.72□□□□□ -0.21
HDAC5-208ENST00000588419 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
HDAC5-208ENST00000588419 LIPCP11150 499 aa13.72□□□□□ -0.21
HDAC5-208ENST00000588419 MYCLP1P12525 358 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms