RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 CCDC177Q9NQR7 707 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PRDM5Q9NQX1 630 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TMEM248Q9NWD8 314 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MOCS1Q9NZB8 636 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 NCKIPSDQ9NZQ3 722 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 BFARQ9NZS9 450 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ATP11BQ9Y2G3 1177 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 SLC27A5Q9Y2P5 690 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MAGEB16A2A368 324 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 H3BNX3 289 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 DFFAO00273 331 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MAFKO60675 156 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ANXA9O76027 345 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 POLBP06746 335 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CTRB1P17538 263 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 LAG3P18627 525 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 NFKB1P19838 968 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CD68P34810 354 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PGM1P36871 562 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PBX3P40426 434 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 GRIA1P42261 906 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 NPY2RP49146 381 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 NIPAL4Q0D2K0 466 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 DNAJC3Q13217 504 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CDONQ4KMG0 1287 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 SFT2D3Q587I9 215 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MS4A13Q5J8X5 152 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CTRB2Q6GPI1 263 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 KIAA1841Q6NSI8 718 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CASC4Q6P4E1 433 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PRSS55Q6UWB4 352 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TAS1R1Q7RTX1 841 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TMC7Q7Z402 723 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CMTR2Q8IYT2 770 aaKnown RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 C4orf33Q8N1A6 199 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MPP5Q8N3R9 675 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 BANPQ8N9N5 519 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TERB1Q8NA31 727 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 TNIP2Q8NFZ5 429 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ZSCAN18Q8TBC5 510 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PEX13Q92968 403 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 ZNF689Q96CS4 500 aaPredicted RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MRRFQ96E11 262 aaKnown RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 APOPT1Q96IL0 206 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 PSKH2Q96QS6 385 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 DHRS9Q9BPW9 319 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 CRISPLD1Q9H336 500 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 RC3H2Q9HBD1 1191 aaKnown RBP9.7□□□□□ -0.86
LINC01539-201ENST00000587904 MAFFQ9ULX9 164 aa9.7□□□□□ -0.86
LINC01539-201ENST00000587904 BRCA2P51587 3418 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 A0A1W2PPM1 405 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 FOXO6A8MYZ6 492 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 TLR5O60602 858 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 JCHAINP01591 159 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 CSH1P0DML2 217 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 CSH2P0DML3 217 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 ATF6P18850 670 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 MGAT1P26572 445 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 IFNA8P32881 189 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 STT3AP46977 705 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 SESN2P58004 480 aaPredicted RBP9.69□□□□□ -0.86
LINC01539-201ENST00000587904 FOLH1Q04609 750 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 SLC18A2Q05940 514 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 PDK4Q16654 411 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 FBXO46Q6PJ61 603 aaPredicted RBP9.69□□□□□ -0.86
LINC01539-201ENST00000587904 RAPH1Q70E73 1250 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 FRA10AC1Q70Z53 315 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 PRPF39Q86UA1 669 aaKnown RBP9.69□□□□□ -0.86
LINC01539-201ENST00000587904 HEATR4Q86WZ0 1026 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 CCDC117Q8IWD4 279 aaPredicted RBP9.69□□□□□ -0.86
LINC01539-201ENST00000587904 GPR65Q8IYL9 337 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 SLC39A11Q8N1S5 342 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 MINDY2Q8NBR6 621 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 DEPDC1BQ8WUY9 529 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 ARNTL2Q8WYA1 636 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 ARMC5Q96C12 935 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 RMDN1Q96DB5 314 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 PHF12Q96QT6 1004 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 FCRL5Q96RD9 977 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 MLPHQ9BV36 600 aaPredicted RBP9.69□□□□□ -0.86
LINC01539-201ENST00000587904 TDRD1Q9BXT4 1180 aaKnown RBP9.69□□□□□ -0.86
LINC01539-201ENST00000587904 SLC39A8Q9C0K1 460 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 IL22Q9GZX6 179 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 C11orf49Q9H6J7 331 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 NUDT5Q9UKK9 219 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 CDH7Q9ULB5 785 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 VANGL2Q9ULK5 521 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 ANGPTL3Q9Y5C1 460 aa9.69□□□□□ -0.86
LINC01539-201ENST00000587904 SLC12A8A0AV02 714 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 DRGXA6NNA5 263 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 CASQ2O14958 399 aaPredicted RBP9.68□□□□□ -0.86
LINC01539-201ENST00000587904 SIN3BO75182 1162 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 SOAT2O75908 522 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 KLHL2O95198 593 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 BAG2O95816 211 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 OR1D2P34982 312 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 RPA3P35244 121 aaPredicted RBP9.68□□□□□ -0.86
LINC01539-201ENST00000587904 PPP3CCP48454 512 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 MAPKAPK2P49137 400 aa9.68□□□□□ -0.86
LINC01539-201ENST00000587904 GEMP55040 296 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms