RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 ADRB2P07550 413 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 POU2F2P09086 479 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 CLTAP09496 248 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 CHRNB1P11230 501 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SCP2P22307 547 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ACAT1P24752 427 aaKnown RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 LRPAP1P30533 357 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ELF1P32519 619 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 RPL9P32969 192 aaKnown RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 LSP1P33241 339 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ABCD1P33897 745 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 HOXD13P35453 343 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 PRCPP42785 496 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 MATR3P43243 847 aaKnown RBP eCLIP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 NR4A2P43354 598 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 MMP13P45452 471 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 LIG4P49917 911 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 LILRA4P59901 499 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 PHC1P78364 1004 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ALCAMQ13740 583 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 MORC3Q14149 939 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 CCDC6Q16204 474 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 KLHL40Q2TBA0 621 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ATP13A4Q4VNC1 1196 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SLC39A12Q504Y0 691 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 L1TD1Q5T7N2 865 aaKnown RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ZNF658Q5TYW1 1059 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SPATA1Q5VX52 437 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 C9orf57Q5W0N0 161 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 WSCD1Q658N2 575 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 LMBRD2Q68DH5 695 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 CENPPQ6IPU0 288 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ZNF280DQ6N043 979 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 KIAA1161Q6NSJ0 714 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 MTSS1LQ765P7 747 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 DNAJB7Q7Z6W7 309 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 KRT73Q86Y46 540 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SLC41A1Q8IVJ1 513 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ARID3BQ8IVW6 561 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SYCP3Q8IZU3 236 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ZNF610Q8N9Z0 462 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ZBTB44Q8NCP5 570 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 KIAA0895Q8NCT3 520 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 OR7D4Q8NG98 312 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SCFD1Q8WVM8 642 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SMARCD2Q92925 531 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SYAP1Q96A49 352 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ELSPBP1Q96BH3 223 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SAAL1Q96ER3 474 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 BICD1Q96G01 975 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 SLC22A12Q96S37 553 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 TMEM79Q9BSE2 394 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 TMEM206Q9H813 350 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 BRD9Q9H8M2 597 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 LMAN1LQ9HAT1 526 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 BCO1Q9HAY6 547 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 TOPORSQ9NS56 1045 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 RXFP3Q9NSD7 469 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 INTS13Q9NVM9 706 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 THG1LQ9NWX6 298 aaKnown RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 GTSE1Q9NYZ3 720 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 H2AFY2Q9P0M6 372 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 AFF4Q9UHB7 1163 aaKnown RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 DPP7Q9UHL4 492 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 CPSF3Q9UKF6 684 aaKnown RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ADAM21Q9UKJ8 722 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 TMPRSS11EQ9UL52 423 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 EXOC7Q9UPT5 735 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 CCL26Q9Y258 94 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 NME7Q9Y5B8 376 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 PCDHB1Q9Y5F3 818 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 ZFP37Q9Y6Q3 630 aaPredicted RBP4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 PIAS3Q9Y6X2 628 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 USP24Q9UPU5 2620 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 PTPRJQ12913 1337 aa4.96□□□□□ -1.62
RPRD1A-205ENST00000587563 COL4A2P08572 1712 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 CCDC187A0A096LP49 1063 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 CCDC78A2IDD5 438 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 K7ESF4 209 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 PIRO00625 290 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 HNRNPDLO14979 420 aaKnown RBP4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 CLIC2O15247 247 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 OGTO15294 1046 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 TGFB1I1O43294 461 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 TRAPPC3O43617 180 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 EXTL3O43909 919 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 ATP2C2O75185 946 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 KIF20AO95235 890 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 PIGRP01833 764 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 ARSAP15289 507 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 HMGA1P17096 107 aaKnown RBP4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 GABRR2P28476 465 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 YWHAHQ04917 246 aaPredicted RBP4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 GPR17Q13304 367 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 PLD1Q13393 1074 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 PON2Q15165 354 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 KNOP1Q1ED39 458 aaKnown RBP4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 KLHL10Q6JEL2 608 aa4.95□□□□□ -1.62
RPRD1A-205ENST00000587563 PDXDC1Q6P996 788 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms