RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 IMPDH1P20839 514 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 RFC2P35250 354 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 GJA9P57773 515 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 COQ5Q5HYK3 327 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 KIAA0930Q6ICG6 404 aaPredicted RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 OFCC1Q8IZS5 231 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 RAB2BQ8WUD1 216 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 C18orf25Q96B23 403 aaPredicted RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 WDR6Q9NNW5 1121 aaKnown RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 RIC8BQ9NVN3 520 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 EGFL7Q9UHF1 273 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 TLL2Q9Y6L7 1015 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 ADAM23O75077 832 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 CLIC3O95833 236 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 ALDOCP09972 364 aaKnown RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 ZNF182P17025 639 aaPredicted RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 ETFBP38117 255 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 ACAP2Q15057 778 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 CYHR1Q6ZMK1 362 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 TBC1D21Q8IYX1 336 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 MIER2Q8N344 545 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 SLC15A4Q8N697 577 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 PAPD5Q8NDF8 572 aaKnown RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 OLFM1Q99784 485 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 CXCL16Q9H2A7 254 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 TRNAU1APQ9NX07 287 aaKnown RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 GDAP2Q9NXN4 497 aa16.51■□□□□ 0.23
RANBP3-209ENST00000587411 IFT80Q9P2H3 777 aaPredicted RBP16.51■□□□□ 0.23
RANBP3-209ENST00000587411 SCN1AP35498 2009 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 PEX10O60683 326 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CLPXO76031 633 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 SEC14L2O76054 403 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 APBA3O96018 575 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 UMPSP11172 480 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 MBL2P11226 248 aaPredicted RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 OXTRP30559 389 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 ADARB1P78563 741 aaKnown RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 LAMC2Q13753 1193 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CCDC92Q53HC0 331 aaPredicted RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 OTOP3Q7RTS5 596 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 ZC3H7AQ8IWR0 971 aaKnown RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 SFRP1Q8N474 314 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 RNF169Q8NCN4 708 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 L3HYPDHQ96EM0 354 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 ZNF560Q96MR9 790 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 PPP1R2P1Q96PQ5 205 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 PPP1R10Q96QC0 940 aaKnown RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 GPN2Q9H9Y4 310 aaPredicted RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 IL1RL2Q9HB29 575 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 ZFYVE28Q9HCC9 887 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 FBRSL1Q9HCM7 1045 aaKnown RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CMTM6Q9NX76 183 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 SNTG2Q9NY99 539 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 FXYD1O00168 92 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 DYNC1LI2O43237 492 aaPredicted RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 NPR3P17342 541 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CLCN5P51795 746 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 MTA1Q13330 715 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CYP51A1Q16850 503 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 EGFLAMQ63HQ2 1017 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CLEC6AQ6EIG7 209 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CLYBLQ8N0X4 340 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 GABPB2Q8TAK5 448 aaPredicted RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 COPS5Q92905 334 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 FCRL5Q96RD9 977 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 PRKD2Q9BZL6 878 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 TREX1Q9NSU2 369 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 PSME2Q9UL46 239 aa16.5■□□□□ 0.23
RANBP3-209ENST00000587411 UBQLN1Q9UMX0 589 aaKnown RBP16.5■□□□□ 0.23
RANBP3-209ENST00000587411 CITO14578 2027 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 TMEM247A6NEH6 219 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 UNCXA6NJT0 531 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 J3QRK9 145 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 KPNA4O00629 521 aaPredicted RBP16.49■□□□□ 0.23
RANBP3-209ENST00000587411 MATN4O95460 622 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 SLC6A2P23975 617 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 TNK2Q07912 1038 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 ARMCX2Q7L311 632 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 RNF135Q8IUD6 432 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 B3GALNT2Q8NCR0 500 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 OSCP1Q8WVF1 389 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 FBXL8Q96CD0 374 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 PHF21BQ96EK2 531 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 LRCH3Q96II8 777 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 MAGED4Q96JG8 741 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 CYP2S1Q96SQ9 504 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 MTG1Q9BT17 334 aaPredicted RBP16.49■□□□□ 0.23
RANBP3-209ENST00000587411 TRIM54Q9BYV2 358 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 AKTIPQ9H8T0 292 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 ZNF639Q9UID6 485 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 TMED5Q9Y3A6 229 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 ATP6AP2A0A1C7CYW4 349 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 UBFD1O14562 309 aaKnown RBP16.49■□□□□ 0.23
RANBP3-209ENST00000587411 ATP6AP2O75787 350 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 LDLRP01130 860 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 CD4P01730 458 aa16.49■□□□□ 0.23
RANBP3-209ENST00000587411 TXNP10599 105 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms