RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 CCNI2Q6ZMN8 369 aaPredicted RBP20.33■□□□□ 0.85
VAT1-203ENST00000587062 DAAM2Q86T65 1068 aa20.33■□□□□ 0.85
VAT1-203ENST00000587062 RCOR2Q8IZ40 523 aa20.33■□□□□ 0.85
VAT1-203ENST00000587062 FAM181AQ8N9Y4 354 aa20.33■□□□□ 0.85
VAT1-203ENST00000587062 SALL4Q9UJQ4 1053 aa20.33■□□□□ 0.85
VAT1-203ENST00000587062 TDRD6O60522 2096 aaKnown RBP20.33■□□□□ 0.84
VAT1-203ENST00000587062 C1QTNF9BB2RNN3 333 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 TRIM38O00635 465 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 TNFP01375 233 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 C1QTNF9P0C862 333 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 ZNF30P17039 623 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 CETN2P41208 172 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 RPL26P61254 145 aaKnown RBP20.32■□□□□ 0.84
VAT1-203ENST00000587062 SEMG2Q02383 582 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 EIF2B5Q13144 721 aaKnown RBP20.32■□□□□ 0.84
VAT1-203ENST00000587062 PRRT3Q5FWE3 981 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 DENND2CQ68D51 928 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 C11orf63Q6NUN7 778 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 PLD5Q8N7P1 536 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 GATA6Q92908 595 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 NUS1Q96E22 293 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 RBM41Q96IZ5 413 aaKnown RBP20.32■□□□□ 0.84
VAT1-203ENST00000587062 WDR92Q96MX6 357 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 ADGRE3Q9BY15 652 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 KLQ9UEF7 1012 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 RPL26L1Q9UNX3 145 aaKnown RBP20.32■□□□□ 0.84
VAT1-203ENST00000587062 PPIL1Q9Y3C6 166 aa20.32■□□□□ 0.84
VAT1-203ENST00000587062 K7ESM1 405 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 HEXIM1O94992 359 aaKnown RBP20.31■□□□□ 0.84
VAT1-203ENST00000587062 JCHAINP01591 159 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 HOXC4P09017 264 aaPredicted RBP20.31■□□□□ 0.84
VAT1-203ENST00000587062 CKMT1AP12532 417 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 TSHRP16473 764 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 HK3P52790 923 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 SLC10A2Q12908 348 aaPredicted RBP20.31■□□□□ 0.84
VAT1-203ENST00000587062 TFDP3Q5H9I0 405 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 ESRP1Q6NXG1 681 aaKnown RBP20.31■□□□□ 0.84
VAT1-203ENST00000587062 GKN2Q86XP6 184 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 HID1Q8IV36 788 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 CCDC50Q8IVM0 306 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.31■□□□□ 0.84
VAT1-203ENST00000587062 APOLD1Q96LR9 279 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 BAG1Q99933 345 aaPredicted RBP20.31■□□□□ 0.84
VAT1-203ENST00000587062 FERMT1Q9BQL6 677 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 ABCG4Q9H172 646 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 WDR26Q9H7D7 661 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 HYOU1Q9Y4L1 999 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 OR1A2Q9Y585 309 aa20.31■□□□□ 0.84
VAT1-203ENST00000587062 SOWAHDA6NJG2 315 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 C3orf70A6NLC5 250 aaPredicted RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 MTSS1O43312 755 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 PYGLP06737 847 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 GP1BAP07359 652 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 TGM2P21980 687 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 KIAA1024LP59773 190 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 SRP54P61011 504 aaKnown RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 DYNLT1P63172 113 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 IFI35P80217 286 aaPredicted RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 DSC2Q02487 901 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 CNGA3Q16281 694 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 CCDC70Q6NSX1 233 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 PNCKQ6P2M8 343 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 LVRNQ6Q4G3 990 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 RD3Q7Z3Z2 195 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 KIAA1328Q86T90 577 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 RAVER1Q8IY67 606 aaKnown RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 PDCD7Q8N8D1 485 aaKnown RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 KDF1Q8NAX2 398 aaPredicted RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 OR56A4Q8NGH8 313 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 PIH1D2Q8WWB5 315 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 P3H4Q92791 437 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 COQ10AQ96MF6 247 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 MCCC1Q96RQ3 725 aaPredicted RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 LGMNQ99538 433 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 PCDH9Q9HC56 1237 aa20.3■□□□□ 0.84
VAT1-203ENST00000587062 PHPT1Q9NRX4 125 aaPredicted RBP20.3■□□□□ 0.84
VAT1-203ENST00000587062 LMO7DNF2Z398 122 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 KCNK1O00180 336 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 TNFRSF10CO14798 259 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 HLA-DQB2P05538 268 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 FECHP22830 423 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 CDC25BP30305 580 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 TRIM23P36406 574 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 TNNT3P45378 269 aaPredicted RBP20.29■□□□□ 0.84
VAT1-203ENST00000587062 KAZNQ674X7 775 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 MFSD7Q6UXD7 560 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 GAS2L3Q86XJ1 694 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 KATNAL2Q8IYT4 538 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 CACTIN-AS1Q8N1I8 211 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 EXD1Q8NHP7 514 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 CCHCR1Q8TD31 782 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 NSMCE3Q96MG7 304 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 TDRD1Q9BXT4 1180 aaKnown RBP20.29■□□□□ 0.84
VAT1-203ENST00000587062 SEPT10Q9P0V9 454 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 CHKBQ9Y259 395 aa20.29■□□□□ 0.84
VAT1-203ENST00000587062 LRRK1Q38SD2 2015 aa20.28■□□□□ 0.84
VAT1-203ENST00000587062 A0A0J9YYE9 177 aa20.28■□□□□ 0.84
VAT1-203ENST00000587062 GOLGA6CA6NDK9 693 aa20.28■□□□□ 0.84
VAT1-203ENST00000587062 GOLGA6BA6NDN3 693 aa20.28■□□□□ 0.84
VAT1-203ENST00000587062 BTNL10A8MVZ5 291 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms