RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 ENTPD2Q9Y5L3 495 aa17.11■□□□□ 0.33
MBD3-204ENST00000585967 HELZ2Q9BYK8 2649 aaKnown RBP17.11■□□□□ 0.33
MBD3-204ENST00000585967 A0A1W2PQJ5 194 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 GOLGA6L19H0YKK7 550 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 CPP00450 1065 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 TPM3P06753 285 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 RGRP47804 291 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 C19orf57Q0VDD7 668 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 ARHGEF7Q14155 803 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 KRT81Q14533 505 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 LIPIQ6XZB0 460 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 TAF8Q7Z7C8 310 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 ARFGAP1Q8N6T3 406 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 KYQ8NBH2 561 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 KIAA1524Q8TCG1 905 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 PDCD6IPQ8WUM4 868 aaKnown RBP17.1■□□□□ 0.33
MBD3-204ENST00000585967 NUS1Q96E22 293 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 LIN37Q96GY3 246 aaPredicted RBP17.1■□□□□ 0.33
MBD3-204ENST00000585967 TMEM74Q96NL1 305 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 ASCL3Q9NQ33 180 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 PHPT1Q9NRX4 125 aaPredicted RBP17.1■□□□□ 0.33
MBD3-204ENST00000585967 RCOR3Q9P2K3 495 aaPredicted RBP17.1■□□□□ 0.33
MBD3-204ENST00000585967 LCMT1Q9UIC8 334 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 MGAQ8IWI9 3026 aa17.1■□□□□ 0.33
MBD3-204ENST00000585967 COL6A6A6NMZ7 2263 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 ERVH48-1M5A8F1 160 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 PSMD11O00231 422 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 KLK10O43240 276 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 ITGA2BP08514 1039 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 MYCLP1P12525 358 aaPredicted RBP17.09■□□□□ 0.33
MBD3-204ENST00000585967 CA4P22748 312 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 RHDQ02161 417 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 RALGDSQ12967 914 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 HADHQ16836 314 aaKnown RBP17.09■□□□□ 0.33
MBD3-204ENST00000585967 SMTNL2Q2TAL5 461 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 FOXR1Q6PIV2 292 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 USP45Q70EL2 814 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 ZSWIM9Q86XI8 627 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 NIPA2Q8N8Q9 360 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 SLC39A7Q92504 469 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 CCDC74AQ96AQ1 378 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 PDXPQ96GD0 296 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 NAF1Q96HR8 494 aaKnown RBP17.09■□□□□ 0.33
MBD3-204ENST00000585967 SLC46A1Q96NT5 459 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 NUDCD1Q96RS6 583 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 CAAP1Q9H8G2 361 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 MOSPD1Q9UJG1 213 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 ANAPC7Q9UJX3 599 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 PNMA8BQ9ULN7 279 aaPredicted RBP17.09■□□□□ 0.33
MBD3-204ENST00000585967 PHTF1Q9UMS5 762 aa17.09■□□□□ 0.33
MBD3-204ENST00000585967 AHCTF1Q8WYP5 2266 aa17.08■□□□□ 0.33
MBD3-204ENST00000585967 D6RAR5 112 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 MYO1FO00160 1098 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 TRAFD1O14545 582 aaPredicted RBP17.08■□□□□ 0.32
MBD3-204ENST00000585967 PRKCGP05129 697 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 SERPING1P05155 500 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 SKILP12757 684 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 PNLIPP16233 465 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 GLB1P16278 677 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 VIPR1P32241 457 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 MMP13P45452 471 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 SLC10A7Q0GE19 358 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 BIRC2Q13490 618 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 NR1I3Q14994 352 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 MARC1Q5VT66 337 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 ARHGAP36Q6ZRI8 547 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 CYP4V2Q6ZWL3 525 aaPredicted RBP17.08■□□□□ 0.32
MBD3-204ENST00000585967 POLNQ7Z5Q5 900 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 FAM46DQ8NEK8 389 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 FUBP1Q96AE4 644 aaKnown RBP17.08■□□□□ 0.32
MBD3-204ENST00000585967 TMEM159Q96B96 161 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 BBC3Q96PG8 261 aaPredicted RBP17.08■□□□□ 0.32
MBD3-204ENST00000585967 CSPG4P5Q96PW8 444 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 MGME1Q9BQP7 344 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 TRIM7Q9C029 511 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 EPB41L5Q9HCM4 733 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 B4GALT6Q9UBX8 382 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 DNPEPQ9ULA0 475 aa17.08■□□□□ 0.32
MBD3-204ENST00000585967 NTN3O00634 580 aaPredicted RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 HTRA2O43464 458 aaPredicted RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 RPLP0P05388 317 aaKnown RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 PYGLP06737 847 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 CELA2BP08218 269 aaPredicted RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 TRIM23P36406 574 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 SSR1P43307 286 aaKnown RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 INHBCP55103 352 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 ZBED6P86452 979 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 ILF3Q12906 894 aaKnown RBP eCLIP17.07■□□□□ 0.322e-10■□□□□ 10.7
MBD3-204ENST00000585967 TCEA2Q15560 299 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 TAF1BQ53T94 588 aaPredicted RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 ARMC12Q5T9G4 340 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 E4F1Q66K89 784 aaPredicted RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 TIGD7Q6NT04 549 aaPredicted RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 PNCKQ6P2M8 343 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 CCNJLQ8IV13 435 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 ANP32EQ9BTT0 268 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 NUP85Q9BW27 656 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 GSDMCQ9BYG8 508 aa17.07■□□□□ 0.32
MBD3-204ENST00000585967 POLR1EQ9GZS1 481 aaKnown RBP17.07■□□□□ 0.32
MBD3-204ENST00000585967 DPEP2Q9H4A9 486 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms