RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 RAB44Q7Z6P3 723 aaPredicted RBP27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 SLCO6A1Q86UG4 719 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 NT5DC3Q86UY8 548 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 OR4C6Q8NH72 309 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 TBATAQ96M53 351 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 DESI2Q9BSY9 194 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 SCNM1Q9BWG6 230 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 ADGRE3Q9BY15 652 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 SLC13A1Q9BZW2 595 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 EVA1BQ9NVM1 165 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 SPASTQ9UBP0 616 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 AMFRQ9UKV5 643 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 CHKBQ9Y259 395 aa27.23■■□□□ 1.95
SMARCD2-210ENST00000584400 A0A0J9YYE9 177 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 MACROD2A1Z1Q3 448 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 CACNB4O00305 520 aaPredicted RBP27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 PDE2AO00408 941 aaPredicted RBP27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 SCAMP1O15126 338 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 TRBC1P01850 177 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 PDHA1P08559 390 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 KELP23276 732 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 CD86P42081 329 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 PPARDQ03181 441 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 NIPAL4Q0D2K0 466 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 EIF2B5Q13144 721 aaKnown RBP27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 NFATC4Q14934 902 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 PRKD1Q15139 912 aaPredicted RBP27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 LLGL1Q15334 1064 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 TEX44Q53QW1 395 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 PEX26Q7Z412 305 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 CNTD1Q8N815 330 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 NUS1Q96E22 293 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 COQ10AQ96MF6 247 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 AGAP3Q96P47 875 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 FERMT1Q9BQL6 677 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 TSGA10Q9BZW7 698 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 TOR4AQ9NXH8 423 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 NLGN3Q9NZ94 848 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 WASF3Q9UPY6 502 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 NEUROG3Q9Y4Z2 214 aa27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 CNOT1A5YKK6 2376 aaKnown RBP27.22■■□□□ 1.95
SMARCD2-210ENST00000584400 GRID2IPA4D2P6 1211 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 NPIPB15A6NHN6 443 aaPredicted RBP27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 HACD1B0YJ81 288 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 HYAL3O43820 417 aaPredicted RBP27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 DKK1O94907 266 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 CKMT2P17540 419 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 CTPS1P17812 591 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 HNF1BP35680 557 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 TPRG1LQ5T0D9 272 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 FAXCQ5TGI0 409 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 DENND2CQ68D51 928 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 ESRP1Q6NXG1 681 aaKnown RBP27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 BBS12Q6ZW61 710 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 RAVER1Q8IY67 606 aaKnown RBP27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 CHCHD4Q8N4Q1 142 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 UBL4BQ8N7F7 174 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 PNPLA1Q8N8W4 532 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 LRRC57Q8N9N7 239 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 ZNF548Q8NEK5 533 aaPredicted RBP27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 VAT1Q99536 393 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 SLC25A51Q9H1U9 297 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 UCKL1Q9NWZ5 548 aa27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 SAE1Q9UBE0 346 aaPredicted RBP27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 APOBEC3BQ9UH17 382 aaKnown RBP27.21■■□□□ 1.95
SMARCD2-210ENST00000584400 MIF4GDA9UHW6 222 aaKnown RBP27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 APOC4-APOC2K7ER74 178 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 AQP9O43315 295 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 NRDCO43847 1150 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 APOC2P02655 101 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 HOXC4P09017 264 aaPredicted RBP27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 PECAM1P16284 738 aaPredicted RBP27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 SKOR1P84550 965 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 ILKQ13418 452 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 SLC14A2Q15849 920 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 PNCKQ6P2M8 343 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 PHACTR4Q8IZ21 702 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 RNF10Q8N5U6 811 aaKnown RBP27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 LPCAT1Q8NF37 534 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 UBE2Q2Q8WVN8 375 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 DTD2Q96FN9 168 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 IMP4Q96G21 291 aaKnown RBP27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 WDR92Q96MX6 357 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 OR1A2Q9Y585 309 aa27.2■■□□□ 1.94
SMARCD2-210ENST00000584400 COL5A1P20908 1838 aaPredicted RBP27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 FFAR2O15552 330 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 ARHGAP6O43182 974 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 SIGLEC6O43699 453 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 RASGRP1O95267 797 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 ALPIP09923 528 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 TSHRP16473 764 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 LHCGRP22888 699 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 PTPN7P35236 360 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 XRCC4Q13426 336 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 ENPP7Q6UWV6 458 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 KDM7AQ6ZMT4 941 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 ZC3H18Q86VM9 953 aaKnown RBP27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 CBARPQ8N350 705 aaPredicted RBP27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 LMX1AQ8TE12 382 aa27.19■■□□□ 1.94
SMARCD2-210ENST00000584400 TEKT5Q96M29 485 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms