RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 SPAG6O75602 509 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 MT-CO1P00395 513 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 INHAP05111 366 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 JUNP05412 331 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 HPGDP15428 266 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 MPSTP25325 297 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 MAGEA3P43357 314 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CLCNKBP51801 687 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 LILRA4P59901 499 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ZBTB6Q15916 424 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TRIM71Q2Q1W2 868 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TJAP1Q5JTD0 557 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ARHGAP36Q6ZRI8 547 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 GPRIN1Q7Z2K8 1008 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 GALNT7Q86SF2 657 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 DNAAF3Q8N9W5 541 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ZNF296Q8WUU4 475 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 HTR3CQ8WXA8 447 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ARNTL2Q8WYA1 636 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ZNF669Q96BR6 464 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 P2RY11Q96G91 374 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CNBD2Q96M20 576 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PNPLA8Q9NP80 782 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 MIOSQ9NXC5 875 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 USP3Q9Y6I4 520 aa11.67□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PTGESO14684 152 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TRDMT1O14717 391 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PHGDHO43175 533 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 B3GAT3O94766 335 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ENO3P13929 434 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 VCLP18206 1134 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 AXLP30530 894 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CBX5P45973 191 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TAF6P49848 677 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CLCN4P51793 760 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 DAB2P98082 770 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 LIN52Q52LA3 116 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CERCAMQ5T4B2 595 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 WSCD1Q658N2 575 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CDKL3Q8IVW4 592 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PCSK9Q8NBP7 692 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ZNF845Q96IR2 970 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 QKIQ96PU8 341 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 KCNK16Q96T55 309 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CGREF1Q99674 301 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 OMDQ99983 421 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 NUF2Q9BZD4 464 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 C12orf4Q9NQ89 552 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PIGVQ9NUD9 493 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ATXN10Q9UBB4 475 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 DUSP12Q9UNI6 340 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CDH23Q9H251 3354 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ARL5CA6NH57 179 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TMEM233B4DJY2 109 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TK2O00142 265 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TNFRSF10AO00220 468 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 SLC7A4O43246 635 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 GLAP06280 429 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 THP07101 528 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CPA3P15088 417 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CRABP2P29373 138 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 MAP3K7CLP57077 242 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 RACK1P63244 317 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 BST2Q10589 180 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 TUBA3EQ6PEY2 450 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PAQR9Q6ZVX9 377 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PDSS2Q86YH6 399 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 OR52K2Q8NGK3 314 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ZNF566Q969W8 418 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 SPATA16Q9BXB7 569 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 SENP6Q9GZR1 1112 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 COPS7BQ9H9Q2 264 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 SNX15Q9NRS6 342 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 COPG2Q9UBF2 871 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 MTRRQ9UBK8 725 aa11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 RPH3AQ9Y2J0 694 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-231ENST00000584063 OR5K4A6NMS3 321 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 A8MX80 341 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 F8W8V4 182 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 M0QYT0 321 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 GPR182O15218 404 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ABCE1P61221 599 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 INSCQ1MX18 579 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 PPP2R2DQ66LE6 453 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 SLC26A9Q7LBE3 791 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 NRSN1Q8IZ57 195 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ZNF567Q8N184 647 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ANKRD52Q8NB46 1076 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 ATP2A3Q93084 1043 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 HHIPL1Q96JK4 782 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CDRT15Q96T59 188 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 CIB1Q99828 191 aa11.65□□□□□ -0.54
CDK5RAP3-231ENST00000584063 MED10Q9BTT4 135 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms