RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 UBE3AQ05086 875 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 SLC20A2Q08357 652 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 NFIL3Q16649 462 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 GRAMD1BQ3KR37 738 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 ACCSLQ4AC99 568 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 SGO1Q5FBB7 561 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 PMS2CLQ68D20 193 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 ANKRD54Q6NXT1 300 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 CPLX2Q6PUV4 134 aaKnown RBP4.02□□□□□ -1.77
COPS3-217ENST00000583160 LDHAL6AQ6ZMR3 332 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 KRBA2Q6ZNG9 492 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 MTSS1LQ765P7 747 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 KCNH5Q8NCM2 988 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 LRRC8CQ8TDW0 803 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 FBXL8Q96CD0 374 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 ZSCAN31Q96LW9 406 aaPredicted RBP4.02□□□□□ -1.77
COPS3-217ENST00000583160 PGLYRP2Q96PD5 576 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 HAUS8Q9BT25 410 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 ISCA1Q9BUE6 129 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 RIC8AQ9NPQ8 531 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 PSAT1Q9Y617 370 aa4.02□□□□□ -1.77
COPS3-217ENST00000583160 ZCCHC6Q5VYS8 1495 aaKnown RBP4.02□□□□□ -1.77
COPS3-217ENST00000583160 FAM172BPA6NC97 362 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 C16orf97H3BN30 126 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 P2RY10O00398 339 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 BCAT2O15382 392 aaPredicted RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 CGAP01215 116 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 GALTP07902 379 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 G6PDP11413 515 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 CETPP11597 493 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 ANOS1P23352 680 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 EIF2S3P41091 472 aaKnown RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 CLCN3P51790 818 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 CDH15P55291 814 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 DMP1Q13316 513 aaPredicted RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 DSELQ8IZU8 1212 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 ZCCHC9Q8N567 271 aaKnown RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 C11orf65Q8NCR3 313 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 OR13A1Q8NGR1 328 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 NOC3LQ8WTT2 800 aaKnown RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 USP13Q92995 863 aaPredicted RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 BBS4Q96RK4 519 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 TTYH1Q9H313 450 aaPredicted RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 PCDH9Q9HC56 1237 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 MAGEE1Q9HCI5 957 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 MKKSQ9NPJ1 570 aaPredicted RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 CNOT7Q9UIV1 285 aaKnown RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 TINAGQ9UJW2 476 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 POU2F3Q9UKI9 436 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 GPR52Q9Y2T5 361 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 FAM96BQ9Y3D0 163 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 LSM4Q9Y4Z0 139 aaKnown RBP4.01□□□□□ -1.77
COPS3-217ENST00000583160 STON1Q9Y6Q2 735 aa4.01□□□□□ -1.77
COPS3-217ENST00000583160 PDS5AQ29RF7 1337 aaKnown RBP4□□□□□ -1.77
COPS3-217ENST00000583160 FGF17O60258 216 aa4□□□□□ -1.77
COPS3-217ENST00000583160 GUCY1B2O75343 617 aa4□□□□□ -1.77
COPS3-217ENST00000583160 TACC1O75410 805 aa4□□□□□ -1.77
COPS3-217ENST00000583160 HEXAP06865 529 aa4□□□□□ -1.77
COPS3-217ENST00000583160 IL15P40933 162 aaPredicted RBP4□□□□□ -1.77
COPS3-217ENST00000583160 HALP42357 657 aa4□□□□□ -1.77
COPS3-217ENST00000583160 RELQ04864 619 aaPredicted RBP4□□□□□ -1.77
COPS3-217ENST00000583160 PPFIA1Q13136 1202 aa4□□□□□ -1.77
COPS3-217ENST00000583160 CTF1Q16619 201 aa4□□□□□ -1.77
COPS3-217ENST00000583160 ZNF766Q5HY98 468 aa4□□□□□ -1.77
COPS3-217ENST00000583160 IRAK1BP1Q5VVH5 260 aa4□□□□□ -1.77
COPS3-217ENST00000583160 TMEM81Q6P7N7 255 aa4□□□□□ -1.77
COPS3-217ENST00000583160 FBXO46Q6PJ61 603 aaPredicted RBP4□□□□□ -1.77
COPS3-217ENST00000583160 SLC22A25Q6T423 547 aa4□□□□□ -1.77
COPS3-217ENST00000583160 MARK2Q7KZI7 788 aaKnown RBP4□□□□□ -1.77
COPS3-217ENST00000583160 LRRC8DQ7L1W4 858 aa4□□□□□ -1.77
COPS3-217ENST00000583160 TAOK1Q7L7X3 1001 aa4□□□□□ -1.77
COPS3-217ENST00000583160 SLC9B2Q86UD5 537 aa4□□□□□ -1.77
COPS3-217ENST00000583160 CPOQ8IVL8 374 aa4□□□□□ -1.77
COPS3-217ENST00000583160 FOXRED2Q8IWF2 684 aa4□□□□□ -1.77
COPS3-217ENST00000583160 CHERPQ8IWX8 916 aaKnown RBP4□□□□□ -1.77
COPS3-217ENST00000583160 DHX40Q8IX18 779 aaKnown RBP4□□□□□ -1.77
COPS3-217ENST00000583160 ODF3L1Q8IXM7 274 aa4□□□□□ -1.77
COPS3-217ENST00000583160 BEST2Q8NFU1 509 aa4□□□□□ -1.77
COPS3-217ENST00000583160 MAGEC3Q8TD91 643 aa4□□□□□ -1.77
COPS3-217ENST00000583160 HERPUD2Q9BSE4 406 aa4□□□□□ -1.77
COPS3-217ENST00000583160 HEMGNQ9BXL5 484 aa4□□□□□ -1.77
COPS3-217ENST00000583160 INTS2Q9H0H0 1204 aaKnown RBP4□□□□□ -1.77
COPS3-217ENST00000583160 ESRP2Q9H6T0 727 aaKnown RBP4□□□□□ -1.77
COPS3-217ENST00000583160 BPIFA1Q9NP55 256 aa4□□□□□ -1.77
COPS3-217ENST00000583160 ZFP57Q9NU63 452 aa4□□□□□ -1.77
COPS3-217ENST00000583160 MCM9Q9NXL9 1143 aa4□□□□□ -1.77
COPS3-217ENST00000583160 HSF4Q9ULV5 492 aa4□□□□□ -1.77
COPS3-217ENST00000583160 AKR1B15C9JRZ8 316 aaPredicted RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 PIP5K1CO60331 668 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 MT-CYBP00156 380 aaPredicted RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 CYC1P08574 325 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 CDH1P12830 882 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 SHMT1P34896 483 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 DDIT3P35638 169 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 PSMC2P35998 433 aaKnown RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 TMPOP42166 694 aaKnown RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 GLIPR1P48060 266 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 CCR5P51681 352 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms