RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 PELI3Q8N2H9 469 aa21.35■■□□□ 1.01
CSNK1D-221ENST00000582844 ATL2Q8NHH9 583 aa21.35■■□□□ 1.01
CSNK1D-221ENST00000582844 PCDH19Q8TAB3 1148 aa21.35■■□□□ 1.01
CSNK1D-221ENST00000582844 OR1E3Q8WZA6 343 aa21.35■■□□□ 1.01
CSNK1D-221ENST00000582844 FGF11Q92914 225 aa21.35■■□□□ 1.01
CSNK1D-221ENST00000582844 PDXPQ96GD0 296 aa21.35■■□□□ 1.01
CSNK1D-221ENST00000582844 SIRPGQ9P1W8 387 aa21.35■■□□□ 1.01
CSNK1D-221ENST00000582844 A0A1W2PQ67 120 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 CACNB4O00305 520 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 MFSD11O43934 449 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 CPP00450 1065 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 TNFP01375 233 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 H2AFZP0C0S5 128 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 TRIM23P36406 574 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 TAS2R40P59535 323 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 KIAA1024LP59773 190 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 CNGA3Q16281 694 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 SLC18A3Q16572 532 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 ISXQ2M1V0 245 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 ASTE1Q2TB18 679 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 SKOR2Q2VWA4 1001 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 DENND2CQ68D51 928 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 SPECC1LQ69YQ0 1117 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 PNCKQ6P2M8 343 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 LVRNQ6Q4G3 990 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 H2AFVQ71UI9 128 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 KCTD6Q8NC69 237 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 OR8K1Q8NGG5 319 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 SCG3Q8WXD2 468 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 CTNNBL1Q8WYA6 563 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 COQ10AQ96MF6 247 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 LGR4Q9BXB1 951 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 NT5MQ9NPB1 228 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 MRPL40Q9NQ50 206 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 UVRAGQ9P2Y5 699 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 PHTF1Q9UMS5 762 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 DGKBQ9Y6T7 804 aa21.34■■□□□ 1.01
CSNK1D-221ENST00000582844 MAP3K6O95382 1288 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 VIPR1P32241 457 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 ACTN2P35609 894 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 PAFAH1B3Q15102 231 aaKnown RBP21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 TBC1D25Q3MII6 688 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 ANKRD20A8PQ5CZ79 823 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 RALGPS1Q5JS13 557 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 NCBP2-AS2Q69YL0 99 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 GKN2Q86XP6 184 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 LRRC49Q8IUZ0 686 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 CBARPQ8N350 705 aaPredicted RBP21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 TEX26Q8N6G2 289 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 OR56A4Q8NGH8 313 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 TPCN2Q8NHX9 752 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 SNIP1Q8TAD8 396 aaKnown RBP21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 NAT6Q93015 286 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 DNAJC7Q99615 494 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 FGF22Q9HCT0 170 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 GPR34Q9UPC5 381 aa21.33■■□□□ 1.01
CSNK1D-221ENST00000582844 LOC400499M0QZD8 3231 aa21.33■■□□□ 1
CSNK1D-221ENST00000582844 ARHGEF17Q96PE2 2063 aaPredicted RBP21.32■■□□□ 1
CSNK1D-221ENST00000582844 HEXIM1O94992 359 aaKnown RBP21.32■■□□□ 1
CSNK1D-221ENST00000582844 PGLSO95336 258 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 HOXC4P09017 264 aaPredicted RBP21.32■■□□□ 1
CSNK1D-221ENST00000582844 GARSP41250 739 aaKnown RBP21.32■■□□□ 1
CSNK1D-221ENST00000582844 ABCG1P45844 678 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 GABREP78334 506 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 ITKQ08881 620 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 GALNT2Q10471 571 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 PDK2Q15119 407 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 LRRC69Q6ZNQ3 347 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 HSD11B1LQ7Z5J1 315 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 SDR16C5Q8N3Y7 309 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 ARL10Q8N8L6 244 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 KYQ8NBH2 561 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 NUS1Q96E22 293 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 RBM15Q96T37 977 aaKnown RBP eCLIP21.32■■□□□ 16e-8■■■□□ 17.2
CSNK1D-221ENST00000582844 SEMA3CQ99985 751 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 CCDC3Q9BQI4 270 aa21.32■■□□□ 1
CSNK1D-221ENST00000582844 NPIPB15A6NHN6 443 aaPredicted RBP21.31■■□□□ 1
CSNK1D-221ENST00000582844 RRP8O43159 456 aaKnown RBP21.31■■□□□ 1
CSNK1D-221ENST00000582844 CBFA2T2O43439 604 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 PDHA1P08559 390 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 CTPS1P17812 591 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 LHCGRP22888 699 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 KELP23276 732 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 ETV3P41162 512 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 LSSP48449 732 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 ARMC12Q5T9G4 340 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 RBM44Q6ZP01 1051 aaKnown RBP21.31■■□□□ 1
CSNK1D-221ENST00000582844 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.31■■□□□ 1
CSNK1D-221ENST00000582844 LRRN4Q8WUT4 740 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 SCRN2Q96FV2 425 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 ATXN7L3BQ96GX2 97 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 ZNF670Q9BS34 389 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 DEF6Q9H4E7 631 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 WDR26Q9H7D7 661 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 POLR1BQ9H9Y6 1135 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 RABGEF1Q9UJ41 708 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 MOSPD1Q9UJG1 213 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 ENTPD2Q9Y5L3 495 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 RAI2Q9Y5P3 530 aa21.31■■□□□ 1
CSNK1D-221ENST00000582844 UNC13CQ8NB66 2214 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms