RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 FBXO5Q9UKT4 447 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 VPS9D1Q9Y2B5 631 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 MTO1Q9Y2Z2 717 aaKnown RBP9.33□□□□□ -0.92
SS18-220ENST00000582092 ACOT9Q9Y305 439 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 STARD13Q9Y3M8 1113 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 PKP3Q9Y446 797 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 RAI2Q9Y5P3 530 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 PSAT1Q9Y617 370 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 KMT2EQ8IZD2 1858 aa9.33□□□□□ -0.92
SS18-220ENST00000582092 NUP210Q8TEM1 1887 aaPredicted RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 A0A087X1B8 175 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 FAM95CA0A1B0GW59 222 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 GOLGA8CPA6NN73 597 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 MUSKO15146 869 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 H2AFYO75367 372 aaKnown RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 NDUFS3O75489 264 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 ECI2O75521 394 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 RPP40O75818 363 aaKnown RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 SLC4A1P02730 911 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 C1QAP02745 245 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 COL6A2P12110 1019 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 BGNP21810 368 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 LPOP22079 712 aaPredicted RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 NFKBIAP25963 317 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 FOXN2P32314 431 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 EPHA5P54756 1037 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 PTPN5P54829 565 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 POU4F1Q01851 419 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 ZBTB16Q05516 673 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 LMAN2Q12907 356 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 PDE1CQ14123 709 aaPredicted RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 DMC1Q14565 340 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 GRM3Q14832 879 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 CHI3L2Q15782 390 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 TSNAXIP1Q2TAA8 658 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 FSCBQ5H9T9 825 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 PRSS36Q5K4E3 855 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 ALG1LQ6GMV1 187 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 FOXR1Q6PIV2 292 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 LCA5Q86VQ0 697 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 CRLF3Q8IUI8 442 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 FAM217AQ8IXS0 508 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 YAF2Q8IY57 180 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 SIX5Q8N196 739 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 CELF5Q8N6W0 485 aaKnown RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 GBP7Q8N8V2 638 aaPredicted RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 C2CD4AQ8NCU7 369 aaPredicted RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 FLCNQ8NFG4 579 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 OR52K2Q8NGK3 314 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 FGF14Q92915 247 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 ELSPBP1Q96BH3 223 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 TADA1Q96BN2 335 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 TCEAL4Q96EI5 215 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 ZNF778Q96MU6 729 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 GPR22Q99680 433 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 GPR63Q9BZJ6 419 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 ATP13A3Q9H7F0 1226 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 TREX1Q9NSU2 369 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 ABCB8Q9NUT2 735 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 SLC2A6Q9UGQ3 507 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 RIMKLBQ9ULI2 386 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 RUVBL2Q9Y230 463 aaKnown RBP9.32□□□□□ -0.92
SS18-220ENST00000582092 PCDHGC4Q9Y5F7 938 aa9.32□□□□□ -0.92
SS18-220ENST00000582092 MROH6A6NGR9 719 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 CCT8L1PA6NM43 557 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 ANKRD66B4E2M5 251 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 NEDD8-MDP1E9PL57 170 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 H0YHG0 523 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 CD3EAPO15446 510 aaKnown RBP9.31□□□□□ -0.92
SS18-220ENST00000582092 BNIP3LO60238 219 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 SNX3O60493 162 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 EDF1O60869 148 aaKnown RBP9.31□□□□□ -0.92
SS18-220ENST00000582092 DCTN3O75935 186 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 AHSGP02765 367 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 ALDOAP04075 364 aaKnown RBP9.31□□□□□ -0.92
SS18-220ENST00000582092 C2P06681 752 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 BPGMP07738 259 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 ATXN1LP0C7T5 689 aaKnown RBP9.31□□□□□ -0.92
SS18-220ENST00000582092 PIRTP0C851 137 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 MYL2P10916 166 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 CPA3P15088 417 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 CEBPBP17676 345 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 POLR2EP19388 210 aaKnown RBP9.31□□□□□ -0.92
SS18-220ENST00000582092 GRK2P25098 689 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 SERPINA4P29622 427 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 ABL2P42684 1182 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 PLK1P53350 603 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 PRKAA2P54646 552 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 RAB10P61026 200 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 ARF5P84085 180 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 MPP1Q00013 466 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 PRKCQQ04759 706 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 FAM83EQ2M2I3 478 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 AGAP9Q5VTM2 703 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 NCEH1Q6PIU2 408 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 AFTPHQ6ULP2 937 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 PARM1Q6UWI2 310 aa9.31□□□□□ -0.92
SS18-220ENST00000582092 SH2D5Q6ZV89 423 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms