RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ALG1LQ6GMV1 187 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 HIBCHQ6NVY1 386 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 GDPD4Q6W3E5 623 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 RELL1Q8IUW5 271 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 CNPY4Q8N129 248 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 HDDC3Q8N4P3 179 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 PAF1Q8N7H5 531 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 OR6K2Q8NGY2 324 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 RTP4Q96DX8 246 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 SH3GL2Q99962 352 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 ROPN1BQ9BZX4 212 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 ROPN1Q9HAT0 212 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 FBXL12Q9NXK8 326 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 VPS18Q9P253 973 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 TRHDEQ9UKU6 1024 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 TTLL3Q9Y4R7 772 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 PKD1L2Q7Z442 2459 aa13.59□□□□□ -0.23
CSNK1D-220ENST00000581737 A0A1W2PQ67 120 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 RNF103O00237 685 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 MUSKO15146 869 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 INSIG1O15503 277 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 HYAL3O43820 417 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 RNASEH2AO75792 299 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 HLA-DQB2P05538 268 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 UGT2B4P06133 528 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 CTSLP07711 333 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 CR2P20023 1033 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 PTPN3P26045 913 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 CD6P30203 668 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 PHBP35232 272 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 RGRP47804 291 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 BCL2L1Q07817 233 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 ZBTB17Q13105 803 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 MAP7D1Q3KQU3 841 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 KRT71Q3SY84 523 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 TEX44Q53QW1 395 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 AGBL2Q5U5Z8 902 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 PMS2CLQ68D20 193 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 ITPRIPL1Q6GPH6 555 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 PDIK1LQ8N165 341 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 FRMD1Q8N878 549 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 HCAR2Q8TDS4 363 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 SEMA3CQ99985 751 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 FAM118BQ9BPY3 351 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 HDAC8Q9BY41 377 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 TXLNGYQ9BZA5 131 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 BTBD1Q9H0C5 482 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 PCED1AQ9H1Q7 454 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 SGK2Q9HBY8 427 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 KLHL8Q9P2G9 620 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 DKK3Q9UBP4 350 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 SARDHQ9UL12 918 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 CYP8B1Q9UNU6 501 aa13.58□□□□□ -0.24
CSNK1D-220ENST00000581737 IGHV1OR15-9A0A0B4J2B8 117 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 A0A1W2PP55 124 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 LRRC72A6NJI9 287 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 TAF4O00268 1085 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 POLR3GO15318 223 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 KCNN4O15554 427 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 MAP3K13O43283 966 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 NDUFS2O75306 463 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 RHOBTB1O94844 696 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 SERPINF2P08697 491 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 ABHD2P08910 425 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 CEACAM1P13688 526 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 TSHRP16473 764 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 XPAP23025 273 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 NFKBIAP25963 317 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 IVDP26440 423 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 RBL1P28749 1068 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 FDFT1P37268 417 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 SUOXP51687 545 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 NEK3P51956 506 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 MAXP61244 160 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 BASP1P80723 227 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 WASHC5Q12768 1159 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 SLC14A2Q15849 920 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 HIF1AQ16665 826 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 NCEH1Q6PIU2 408 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 BRAT1Q6PJG6 821 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 ARHGEF18Q6ZSZ5 1173 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 ERN2Q76MJ5 926 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 PGBD5Q8N414 524 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 AADATQ8N5Z0 425 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 FAM71DQ8N9W8 422 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 LRRN4Q8WUT4 740 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 ZCCHC14Q8WYQ9 949 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 RAB7BQ96AH8 199 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 ZNF419Q96HQ0 510 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 TEKT5Q96M29 485 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 KLHL32Q96NJ5 620 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 AGAP3Q96P47 875 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 KDM4CQ9H3R0 1056 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 SUV39H2Q9H5I1 410 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 NOD2Q9HC29 1040 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 TMEM9BQ9NQ34 198 aa13.57□□□□□ -0.24
CSNK1D-220ENST00000581737 KLK13Q9UKR3 277 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms