RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 FUBP1Q96AE4 644 aaKnown RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 TMEM159Q96B96 161 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 PDXPQ96GD0 296 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 FOXP3Q9BZS1 431 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 DHX35Q9H5Z1 703 aaKnown RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 SYNDIG1Q9H7V2 258 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 PARVAQ9NVD7 372 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.65□□□□□ -0.7
RFFL-209ENST00000581265 AP4E1Q9UPM8 1137 aa10.65□□□□□ -0.7
RFFL-209ENST00000581265 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.71
RFFL-209ENST00000581265 TMEM191CA6NGB0 347 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 PDE2AO00408 941 aaPredicted RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 EEF2KO00418 725 aaKnown RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 TERTO14746 1132 aaKnown RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 PRKCGP05129 697 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 PCCBP05166 539 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 GM2AP17900 193 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 ERCC2P18074 760 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 CDK11BP21127 795 aaKnown RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 TNFAIP3P21580 790 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 ZNF135P52742 658 aaPredicted RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 MYL5Q02045 173 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 BCL2L1Q07817 233 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 IL10RBQ08334 325 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 UBAP2LQ14157 1087 aaKnown RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 TCEA2Q15560 299 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 ZSCAN23Q3MJ62 389 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 PNCKQ6P2M8 343 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 XKR5Q6UX68 686 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 RFX8Q6ZV50 586 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 DPPA4Q7L190 304 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 TAF8Q7Z7C8 310 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 CCNJLQ8IV13 435 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 PSTKQ8IV42 348 aaKnown RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 CBARPQ8N350 705 aaPredicted RBP10.64□□□□□ -0.71
RFFL-209ENST00000581265 FAM46DQ8NEK8 389 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 PSKH2Q96QS6 385 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 LGR4Q9BXB1 951 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 TMEM168Q9H0V1 697 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 HSD3B7Q9H2F3 369 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 EPB41L5Q9HCM4 733 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 FGF22Q9HCT0 170 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 ANO10Q9NW15 660 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 GPATCH2LQ9NWQ4 482 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 TAS2R14Q9NYV8 317 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 MYO6Q9UM54 1294 aa10.64□□□□□ -0.71
RFFL-209ENST00000581265 ARHGEF17Q96PE2 2063 aaPredicted RBP10.63□□□□□ -0.71
RFFL-209ENST00000581265 ENO4A6NNW6 628 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 DAPK3O43293 454 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 NUDT21O43809 227 aaKnown RBP10.63□□□□□ -0.71
RFFL-209ENST00000581265 RNF8O76064 485 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 ELFN1P0C7U0 828 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 JMJD7P0C870 316 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 HGFP14210 728 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 PSMA2P25787 234 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 SCNN1BP51168 640 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 RENBPP51606 427 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 AP1S1P61966 158 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 NFKB2Q00653 900 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 HLTFQ14527 1009 aaKnown RBP eCLIP10.63□□□□□ -0.71
RFFL-209ENST00000581265 NCAPHQ15003 741 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 C14orf28Q4W4Y0 310 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 SASS6Q6UVJ0 657 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 SPRED1Q7Z699 444 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 LZTR1Q8N653 840 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 NPWQ8N729 165 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 Q8N9G6 341 aaPredicted RBP10.63□□□□□ -0.71
RFFL-209ENST00000581265 FNIP1Q8TF40 1166 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 NSMCE3Q96MG7 304 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 ZNF599Q96NL3 588 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 PEBP4Q96S96 227 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 KCTD15Q96SI1 283 aaPredicted RBP10.63□□□□□ -0.71
RFFL-209ENST00000581265 SNRNP25Q9BV90 132 aaKnown RBP10.63□□□□□ -0.71
RFFL-209ENST00000581265 CINPQ9BW66 212 aaPredicted RBP10.63□□□□□ -0.71
RFFL-209ENST00000581265 B3GNT4Q9C0J1 378 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 DPEP2Q9H4A9 486 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 SP110Q9HB58 689 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 MRPL40Q9NQ50 206 aaKnown RBP10.63□□□□□ -0.71
RFFL-209ENST00000581265 KCTD5Q9NXV2 234 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 LRIT1Q9P2V4 623 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 PCSK1NQ9UHG2 260 aa10.63□□□□□ -0.71
RFFL-209ENST00000581265 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.62□□□□□ -0.71
RFFL-209ENST00000581265 A0A1W2PQ67 120 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 DFFAO00273 331 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 HTRA2O43464 458 aaPredicted RBP10.62□□□□□ -0.71
RFFL-209ENST00000581265 B4GAT1O43505 415 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 PRPSAP2O60256 369 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 GZMAP12544 262 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 ATP1A3P13637 1013 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 MIPP30301 263 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 B4GALNT1Q00973 533 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 SLC10A7Q0GE19 358 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 ARHGEF7Q14155 803 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 LBRQ14739 615 aaKnown RBP10.62□□□□□ -0.71
RFFL-209ENST00000581265 ACOX1Q15067 660 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 TGIF1Q15583 401 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
RFFL-209ENST00000581265 SPECC1LQ69YQ0 1117 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 ARHGAP36Q6ZRI8 547 aa10.62□□□□□ -0.71
RFFL-209ENST00000581265 CYP4V2Q6ZWL3 525 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms