RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 PELI3Q8N2H9 469 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 ATL2Q8NHH9 583 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 PCDH19Q8TAB3 1148 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 OR1E3Q8WZA6 343 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 FGF11Q92914 225 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 PDXPQ96GD0 296 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 SIRPGQ9P1W8 387 aa21.35■■□□□ 1.01
CSNK1D-215ENST00000580784 A0A1W2PQ67 120 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 CACNB4O00305 520 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 MFSD11O43934 449 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 CPP00450 1065 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 TNFP01375 233 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 H2AFZP0C0S5 128 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 TRIM23P36406 574 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 TAS2R40P59535 323 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 KIAA1024LP59773 190 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 CNGA3Q16281 694 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 SLC18A3Q16572 532 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 ISXQ2M1V0 245 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 ASTE1Q2TB18 679 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 SKOR2Q2VWA4 1001 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 DENND2CQ68D51 928 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 SPECC1LQ69YQ0 1117 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 PNCKQ6P2M8 343 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 LVRNQ6Q4G3 990 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 H2AFVQ71UI9 128 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 KCTD6Q8NC69 237 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 OR8K1Q8NGG5 319 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 SCG3Q8WXD2 468 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 CTNNBL1Q8WYA6 563 aaPredicted RBP21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 COQ10AQ96MF6 247 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 LGR4Q9BXB1 951 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 NT5MQ9NPB1 228 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 MRPL40Q9NQ50 206 aaKnown RBP21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 UVRAGQ9P2Y5 699 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 PHTF1Q9UMS5 762 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 DGKBQ9Y6T7 804 aa21.34■■□□□ 1.01
CSNK1D-215ENST00000580784 MAP3K6O95382 1288 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 VIPR1P32241 457 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 ACTN2P35609 894 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 PAFAH1B3Q15102 231 aaKnown RBP21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 TBC1D25Q3MII6 688 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 ANKRD20A8PQ5CZ79 823 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 RALGPS1Q5JS13 557 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 NCBP2-AS2Q69YL0 99 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 GKN2Q86XP6 184 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 LRRC49Q8IUZ0 686 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 CBARPQ8N350 705 aaPredicted RBP21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 TEX26Q8N6G2 289 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 OR56A4Q8NGH8 313 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 TPCN2Q8NHX9 752 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 SNIP1Q8TAD8 396 aaKnown RBP21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 NAT6Q93015 286 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 DNAJC7Q99615 494 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 FGF22Q9HCT0 170 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 GPR34Q9UPC5 381 aa21.33■■□□□ 1.01
CSNK1D-215ENST00000580784 LOC400499M0QZD8 3231 aa21.33■■□□□ 1
CSNK1D-215ENST00000580784 ARHGEF17Q96PE2 2063 aaPredicted RBP21.32■■□□□ 1
CSNK1D-215ENST00000580784 HEXIM1O94992 359 aaKnown RBP21.32■■□□□ 1
CSNK1D-215ENST00000580784 PGLSO95336 258 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 HOXC4P09017 264 aaPredicted RBP21.32■■□□□ 1
CSNK1D-215ENST00000580784 GARSP41250 739 aaKnown RBP21.32■■□□□ 1
CSNK1D-215ENST00000580784 ABCG1P45844 678 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 GABREP78334 506 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 ITKQ08881 620 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 GALNT2Q10471 571 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 PDK2Q15119 407 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 LRRC69Q6ZNQ3 347 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 HSD11B1LQ7Z5J1 315 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 SDR16C5Q8N3Y7 309 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 ARL10Q8N8L6 244 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 KYQ8NBH2 561 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 NUS1Q96E22 293 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 RBM15Q96T37 977 aaKnown RBP eCLIP21.32■■□□□ 1
CSNK1D-215ENST00000580784 SEMA3CQ99985 751 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 CCDC3Q9BQI4 270 aa21.32■■□□□ 1
CSNK1D-215ENST00000580784 NPIPB15A6NHN6 443 aaPredicted RBP21.31■■□□□ 1
CSNK1D-215ENST00000580784 RRP8O43159 456 aaKnown RBP21.31■■□□□ 1
CSNK1D-215ENST00000580784 CBFA2T2O43439 604 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 PDHA1P08559 390 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 CTPS1P17812 591 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 LHCGRP22888 699 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 KELP23276 732 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 ETV3P41162 512 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 LSSP48449 732 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 ARMC12Q5T9G4 340 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 RBM44Q6ZP01 1051 aaKnown RBP21.31■■□□□ 1
CSNK1D-215ENST00000580784 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.31■■□□□ 1
CSNK1D-215ENST00000580784 LRRN4Q8WUT4 740 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 SCRN2Q96FV2 425 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 ATXN7L3BQ96GX2 97 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 ZNF670Q9BS34 389 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 DEF6Q9H4E7 631 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 WDR26Q9H7D7 661 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 POLR1BQ9H9Y6 1135 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 RABGEF1Q9UJ41 708 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 MOSPD1Q9UJG1 213 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 ENTPD2Q9Y5L3 495 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 RAI2Q9Y5P3 530 aa21.31■■□□□ 1
CSNK1D-215ENST00000580784 UNC13CQ8NB66 2214 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms