RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 KRT23Q9C075 422 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CTDSP1Q9GZU7 261 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 CLPBQ9H078 707 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ST6GALNAC4Q9H4F1 302 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TLR8Q9NR97 1041 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ANO10Q9NW15 660 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ARHGEF38Q9NXL2 777 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ETAA1Q9NY74 926 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PSD3Q9NYI0 1048 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 TAS2R3Q9NYW6 316 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 ACTR3BQ9P1U1 418 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 NKX1-2Q9UD57 310 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 FBXL17Q9UF56 701 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 IL19Q9UHD0 177 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 STEAP1Q9UHE8 339 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 RCE1Q9Y256 329 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 SLC27A6Q9Y2P4 619 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MRPS17Q9Y2R5 130 aaKnown RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 MAP3K2Q9Y2U5 619 aa3.22□□□□□ -1.89
KPNB1-208ENST00000580019 POLR1AO95602 1720 aaPredicted RBP3.22□□□□□ -1.89
KPNB1-208ENST00000580019 PNPLA7Q6ZV29 1317 aa3.21□□□□□ -1.89
KPNB1-208ENST00000580019 IGSF1Q8N6C5 1336 aa3.21□□□□□ -1.89
KPNB1-208ENST00000580019 ROBO1Q9Y6N7 1651 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 STRCP1A6NGW2 1772 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 AGLP35573 1532 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 A0A1W2PRV1 198 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 A6NL46 340 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 OR6C76A6NM76 312 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 TBKBP1A7MCY6 615 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 GRM8O00222 908 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 PER2O15055 1255 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 NKX2-8O15522 239 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 HS6ST1O60243 411 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CCNT1O60563 726 aaKnown RBP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CDKL5O76039 1030 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CHRM4P08173 479 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CYP3A4P08684 503 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM225BP0DP42 221 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CYP2A6P11509 494 aaPredicted RBP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 GABRB1P18505 474 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 TYMPP19971 482 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 DRD1P21728 446 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 KELP23276 732 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 FMO4P31512 558 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 HSPA4P34932 840 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 PBX1P40424 430 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CCR3P51677 355 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 RPS6KA3P51812 740 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 MVDP53602 400 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 PMS2P54278 862 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 STX1BP61266 288 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CDK18Q07002 472 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ZNF844Q08AG5 666 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 LMAN2Q12907 356 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 RALGDSQ12967 914 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 MRPL49Q13405 166 aaKnown RBP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 BFSP2Q13515 415 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 INAQ16352 499 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 HYAL4Q2M3T9 481 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ANKRD20A4Q4UJ75 823 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ANKRD20A8PQ5CZ79 823 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ZRANB3Q5FWF4 1079 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ANKRD20A2Q5SQ80 823 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ANKRD20A1Q5TYW2 823 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ANKRD20A3Q5VUR7 823 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 JADE1Q6IE81 842 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 SUSD1Q6UWL2 747 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 SLC30A10Q6XR72 485 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 MEPCEQ7L2J0 689 aaKnown RBP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 OTOAQ7RTW8 1153 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 RABEPKQ7Z6M1 372 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 HOOK3Q86VS8 718 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 FAM217AQ8IXS0 508 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 SLC15A3Q8IY34 581 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 SYCP3Q8IZU3 236 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CFAP52Q8N1V2 620 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 IQUBQ8NA54 791 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 RAB40AQ8WXH6 277 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 SEPT1Q8WYJ6 367 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 MR1Q95460 341 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 PTERQ96BW5 349 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 HDAC11Q96DB2 347 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 LRIG1Q96JA1 1093 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 C1orf74Q96LT6 269 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 EGFL8Q99944 293 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 NUP85Q9BW27 656 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 TEX13BQ9BXU2 312 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 TRIM6Q9C030 488 aaPredicted RBP3.21□□□□□ -1.9
KPNB1-208ENST00000580019 SLC5A7Q9GZV3 580 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 NT5C3AQ9H0P0 336 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 EBF3Q9H4W6 596 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 EPHX3Q9H6B9 360 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 CXorf36Q9H7Y0 433 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 POLR1BQ9H9Y6 1135 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 KCNK9Q9NPC2 374 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 ZBTB40Q9NUA8 1239 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 COMMD8Q9NX08 183 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 DLGAP2Q9P1A6 1054 aa3.21□□□□□ -1.9
KPNB1-208ENST00000580019 EXTL2Q9UBQ6 330 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms