RNA–Protein interactions for RNA: ENST00000579531.5

MSI2-211, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-211	ENST00000579531	C17orf99	Q6UX52	265 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	NAPRT	Q6XQN6	538 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	KYAT3	Q6YP21	454 aa	Known RBP	4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	STOX1	Q6ZVD7	989 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	MOB2	Q70IA6	237 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	TRIM74	Q86UV6	250 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	TRIM73	Q86UV7	250 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	UEVLD	Q8IX04	471 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	MYOCD	Q8IZQ8	938 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	CTCFL	Q8NI51	663 aa	Predicted RBP	4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	GIMAP1	Q8WWP7	306 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	TAF4B	Q92750	862 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	SLF1	Q9BQI6	1058 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	LLPH	Q9BRT6	129 aa	Known RBP	4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	ELOVL1	Q9BW60	279 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	GPR63	Q9BZJ6	419 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	RIOX1	Q9H6W3	641 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	SLC38A10	Q9HBR0	1119 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	TRPV5	Q9NQA5	729 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	IRAK4	Q9NWZ3	460 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	CLIP2	Q9UDT6	1046 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	TMCC3	Q9ULS5	477 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	STX8	Q9UNK0	236 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	PCDHA10	Q9Y5I2	948 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	CEP350	Q5VT06	3117 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	PFAS	O15067	1338 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	ITIH6	Q6UXX5	1313 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	STK36	Q9NRP7	1315 aa		4.21	□□□□□ -1.74
MSI2-211	ENST00000579531	KRTAP9-6	A0A140TA67	174 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ESYT2	A0FGR8	921 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	TMEM247	A6NEH6	219 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	TMEM232	C9JQI7	657 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	STX16-NPEPL1	H3BU86	382 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531		M0QYT0	321 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	VWA5A	O00534	786 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	STX16	O14662	325 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ZBTB43	O43298	467 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ZBED4	O75132	1171 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	PRDM1	O75626	825 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	FLOT1	O75955	427 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	RNF8	O76064	485 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ICAM1	P05362	532 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	POLB	P06746	335 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CAST	P20810	708 aa	Known RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	SFPQ	P23246	707 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CNTF	P26441	200 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	HOXD10	P28358	340 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CTCF	P49711	727 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CCR5	P51681	352 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	RPS6KA3	P51812	740 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ZNF131	P52739	623 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	FAM3B	P58499	235 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	PDCL	Q13371	301 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ALKBH1	Q13686	389 aa	Known RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	TRIM29	Q14134	588 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	RUNDC3A	Q59EK9	446 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ZNF484	Q5JVG2	852 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	LCE3B	Q5TA77	95 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CPLX2	Q6PUV4	134 aa	Known RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531		Q6ZPA2	131 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CYB5R4	Q7L1T6	521 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ZNF627	Q7L945	461 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	PCYOX1L	Q8NBM8	494 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	GPRC5A	Q8NFJ5	357 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CCDC12	Q8WUD4	166 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	HTRA1	Q92743	480 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	SNX21	Q969T3	373 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ARRDC3	Q96B67	414 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	SKA1	Q96BD8	255 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ZNF764	Q96H86	408 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ERO1A	Q96HE7	468 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	PRR11	Q96HE9	360 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CCDC34	Q96HJ3	373 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	JAKMIP1	Q96N16	626 aa	Known RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	CD180	Q99467	661 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	SLC26A6	Q9BXS9	759 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	TEX13B	Q9BXU2	312 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	NUAK2	Q9H093	628 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	PLEKHA2	Q9HB19	425 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	SH3GLB2	Q9NR46	395 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	COMMD8	Q9NX08	183 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	PPP1R14D	Q9NXH3	145 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	RNF186	Q9NXI6	227 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ST3GAL5	Q9UNP4	418 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	ABCB11	O95342	1321 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	EMSY	Q7Z589	1322 aa		4.2	□□□□□ -1.74
MSI2-211	ENST00000579531	EVPL	Q92817	2033 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	GOLGA6L10	A0A0M3HER8	536 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	FSD2	A1L4K1	749 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	SLC15A5	A6NIM6	579 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	AGAP5	A6NIR3	686 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	TMEM110-MUSTN1	A8MSY1	372 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531		B4DLN1	442 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	KLRF2	D3W0D1	207 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	SMIM22	K7EJ46	135 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	ZBTB5	O15062	677 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	PFKFB2	O60825	505 aa		4.19	□□□□□ -1.74
MSI2-211	ENST00000579531	TULP3	O75386	442 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms