RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 CDKN2BP42772 138 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 NR2C2P49116 596 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 RPL26P61254 145 aaKnown RBP14.88□□□□□ -0.03
SS18-212ENST00000579061 DSC2Q02487 901 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 PPARDQ03181 441 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 TFDP2Q14188 446 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 INPP5AQ14642 412 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 NFATC4Q14934 902 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 ACOX1Q15067 660 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 CNGA3Q16281 694 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 MFSD7Q6UXD7 560 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 KDM7AQ6ZMT4 941 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 USP45Q70EL2 814 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 TMPRSS12Q86WS5 348 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 RFX6Q8HWS3 928 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 KATNAL2Q8IYT4 538 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 SDR16C5Q8N3Y7 309 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 KDF1Q8NAX2 398 aaPredicted RBP14.88□□□□□ -0.03
SS18-212ENST00000579061 ARRDC2Q8TBH0 407 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 RNF25Q96BH1 459 aaPredicted RBP14.88□□□□□ -0.03
SS18-212ENST00000579061 OLFM3Q96PB7 478 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 SLC13A1Q9BZW2 595 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 IMPACTQ9P2X3 320 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 APOBEC3BQ9UH17 382 aaKnown RBP14.88□□□□□ -0.03
SS18-212ENST00000579061 RPL26L1Q9UNX3 145 aaKnown RBP14.88□□□□□ -0.03
SS18-212ENST00000579061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.88□□□□□ -0.03
SS18-212ENST00000579061 HYOU1Q9Y4L1 999 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 CACNA1BQ00975 2339 aa14.88□□□□□ -0.03
SS18-212ENST00000579061 FFAR2O15552 330 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 ZRANB2O95218 330 aaKnown RBP eCLIP14.87□□□□□ -0.03
SS18-212ENST00000579061 JCHAINP01591 159 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 PCCBP05166 539 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 CKMT1AP12532 417 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 TNNT1P13805 278 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 KELP23276 732 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 DUSP3P51452 185 aaPredicted RBP14.87□□□□□ -0.03
SS18-212ENST00000579061 KIAA1024LP59773 190 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 DAB2P98082 770 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 E2F1Q01094 437 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 ARHGEF7Q14155 803 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 ST3GAL2Q16842 350 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 FAXCQ5TGI0 409 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 ZCCHC8Q6NZY4 707 aaKnown RBP14.87□□□□□ -0.03
SS18-212ENST00000579061 DHRS13Q6UX07 377 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 RAVER1Q8IY67 606 aaKnown RBP14.87□□□□□ -0.03
SS18-212ENST00000579061 RCOR2Q8IZ40 523 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 CACTIN-AS1Q8N1I8 211 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 FSTL5Q8N475 847 aaPredicted RBP14.87□□□□□ -0.03
SS18-212ENST00000579061 APOLD1Q96LR9 279 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 WDR92Q96MX6 357 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 LGMNQ99538 433 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 TDRD1Q9BXT4 1180 aaKnown RBP14.87□□□□□ -0.03
SS18-212ENST00000579061 NCKIPSDQ9NZQ3 722 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 SALL4Q9UJQ4 1053 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 DNPEPQ9ULA0 475 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 PNMA8BQ9ULN7 279 aaPredicted RBP14.87□□□□□ -0.03
SS18-212ENST00000579061 MYLKQ15746 1914 aa14.87□□□□□ -0.03
SS18-212ENST00000579061 IGF2RP11717 2491 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 A0A0J9YYE9 177 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 NPIPB15A6NHN6 443 aaPredicted RBP14.86□□□□□ -0.03
SS18-212ENST00000579061 A8MX80 341 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 LMO7DNF2Z398 122 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 KCNK1O00180 336 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 CACNB4O00305 520 aaPredicted RBP14.86□□□□□ -0.03
SS18-212ENST00000579061 TNFRSF10CO14798 259 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 PJA2O43164 708 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 RASGRP1O95267 797 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 TRBC1P01850 177 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 PDHA1P08559 390 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 ZNF30P17039 623 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 TGM2P21980 687 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 TEAD1P28347 426 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 HK3P52790 923 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 NIPAL4Q0D2K0 466 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 AP1B1Q10567 949 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 IHHQ14623 411 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 SLC14A2Q15849 920 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 CCDC157Q569K6 752 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 PRRT3Q5FWE3 981 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 TFDP3Q5H9I0 405 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 PNCKQ6P2M8 343 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 ENPP7Q6UWV6 458 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 RAD9BQ6WBX8 426 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 SPOCD1Q6ZMY3 1216 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 DAAM2Q86T65 1068 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 RBFAQ8N0V3 343 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 CNTD1Q8N815 330 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 PLA2G15Q8NCC3 412 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 EXD1Q8NHP7 514 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 LMX1AQ8TE12 382 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 NUS1Q96E22 293 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 DTD2Q96FN9 168 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 RBM41Q96IZ5 413 aaKnown RBP14.86□□□□□ -0.03
SS18-212ENST00000579061 BAG1Q99933 345 aaPredicted RBP14.86□□□□□ -0.03
SS18-212ENST00000579061 GOLPH3Q9H4A6 298 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 CAAP1Q9H8G2 361 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 TFR2Q9UP52 801 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 TTLL3Q9Y4R7 772 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 DGKBQ9Y6T7 804 aa14.86□□□□□ -0.03
SS18-212ENST00000579061 ASXL3Q9C0F0 2248 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms