RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 STARD8Q92502 1023 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 SMARCE1Q969G3 411 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 RTP4Q96DX8 246 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 CYP4F12Q9HCS2 524 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 CUEDC1Q9NWM3 386 aaPredicted RBP8.73□□□□□ -1.01
BRIP1-204ENST00000579028 OCIAD1Q9NX40 245 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 LHX3Q9UBR4 397 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 TMEM59LQ9UK28 342 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 NEU3Q9UQ49 428 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 TMEM184BQ9Y519 407 aaPredicted RBP8.73□□□□□ -1.01
BRIP1-204ENST00000579028 KCTD3Q9Y597 815 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRIP1-204ENST00000579028 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
BRIP1-204ENST00000579028 IGHV1OR21-1A0A087WYE8 117 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 EFCAB7A8K855 629 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 MKRN2OSH3BPM6 223 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 K7EM74 188 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 INSIG1O15503 277 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 VPS4BO75351 444 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 RECQL5O94762 991 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 PIGNO95427 931 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 ECEL1O95672 775 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 RNF224P0DH78 156 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TCN2P20062 427 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 GNLYP22749 145 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 RALGDSQ12967 914 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 GRM3Q14832 879 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 RWDD4Q6NW29 188 aaKnown RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 ERAP2Q6P179 960 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TMEM71Q6P5X7 295 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 BRAT1Q6PJG6 821 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 ARCQ7LC44 396 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TIPARPQ7Z3E1 657 aaKnown RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 ZSWIM9Q86XI8 627 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 FAM129CQ86XR2 697 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 XYLT1Q86Y38 959 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 CCDC13Q8IYE1 715 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 NRSN1Q8IZ57 195 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 UNC5BQ8IZJ1 945 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 C18orf8Q96DM3 657 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 CFAP57Q96MR6 1250 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 ZNF641Q96N77 438 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 NCAPGQ9BPX3 1015 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 LGR4Q9BXB1 951 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 GSDMCQ9BYG8 508 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 SCAND2PQ9GZW5 306 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TRIT1Q9H3H1 467 aaKnown RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 SUV39H2Q9H5I1 410 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 PLCB1Q9NQ66 1216 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 PRDM8Q9NQV8 689 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TRNAU1APQ9NX07 287 aaKnown RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TMEM9Q9P0T7 183 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TAAR2Q9P1P5 351 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 PDP2Q9P2J9 529 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 APEX2Q9UBZ4 518 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 OR12D3Q9UGF7 316 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 VPS4AQ9UN37 437 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 ATP8A1Q9Y2Q0 1164 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 USP9YO00507 2555 aaPredicted RBP8.72□□□□□ -1.01
BRIP1-204ENST00000579028 NBASA2RRP1 2371 aa8.72□□□□□ -1.01
BRIP1-204ENST00000579028 TEX15Q9BXT5 2789 aa8.71□□□□□ -1.01
BRIP1-204ENST00000579028 CACNA1DQ01668 2161 aa8.71□□□□□ -1.01
BRIP1-204ENST00000579028 BICDL2A1A5D9 508 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 FAM72CH0Y354 149 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 PDE2AO00408 941 aaPredicted RBP8.71□□□□□ -1.02
BRIP1-204ENST00000579028 PPM1DO15297 605 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 LRIG2O94898 1065 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 DLGAP3O95886 979 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 PRKCGP05129 697 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 SLC9A1P19634 815 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 MAN1A1P33908 653 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 ADRA1BP35368 520 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 CLCN1P35523 988 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 GPLD1P80108 840 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 MC2RQ01718 297 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 APBA1Q02410 837 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 ILF3Q12906 894 aaKnown RBP eCLIP8.71□□□□□ -1.02
BRIP1-204ENST00000579028 RAPGEF1Q13905 1077 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 ATP1A1-AS1Q5TC04 95 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 FAM72AQ5TYM5 149 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 NKAIN2Q5VXU1 208 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 KLHL10Q6JEL2 608 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 FAM72DQ6L9T8 149 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 CEACAM20Q6UY09 585 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 LIPIQ6XZB0 460 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 SLC47A2Q86VL8 602 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 HEATR4Q86WZ0 1026 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 FAM72BQ86X60 149 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 DNAAF5Q86Y56 855 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 NAGSQ8N159 534 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 NETO2Q8NC67 525 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 TMEM35BQ8NCS4 154 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 NELFBQ8WX92 580 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 PATE1Q8WXA2 126 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 TBC1D31Q96DN5 1066 aa8.71□□□□□ -1.02
BRIP1-204ENST00000579028 ZPBPQ9BS86 351 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms