RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RBM15Q96T37 977 aaKnown RBP eCLIP8.07□□□□□ -1.12
COPS3-215ENST00000578317 GABRG3Q99928 467 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 OSBPL1AQ9BXW6 950 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 OSBPL6Q9BZF3 934 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 DPH5Q9H2P9 285 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ATP13A3Q9H7F0 1226 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 XAB2Q9HCS7 855 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 ARHGEF3Q9NR81 526 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.07□□□□□ -1.12
COPS3-215ENST00000578317 TMA7Q9Y2S6 64 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 PPIL1Q9Y3C6 166 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 STON1Q9Y6Q2 735 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 V9GYY5 206 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 KIF26AQ9ULI4 1882 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 NUP205Q92621 2012 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 MAGEB16A2A368 324 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TRAFD1O14545 582 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 EIF3HO15372 352 aaKnown RBP eCLIP8.07□□□□□ -1.12
COPS3-215ENST00000578317 TMEM63AO94886 807 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 EGFP01133 1207 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 PRLP01236 227 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CHRNB1P11230 501 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ALADP13716 330 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ACPPP15309 386 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 HLA-DPA1P20036 260 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CD33P20138 364 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CA4P22748 312 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ITPKAP23677 461 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 IL12RB1P42701 662 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 NPY2RP49146 381 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CCNHP51946 323 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 VSNL1P62760 191 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 BCL2L1Q07817 233 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CAMK2GQ13555 558 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 ELAVL3Q14576 367 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 BRD3Q15059 726 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 KCTD19Q17RG1 926 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 FNDC3BQ53EP0 1204 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 FAXCQ5TGI0 409 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 EGFLAMQ63HQ2 1017 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 DENND5AQ6IQ26 1287 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 SDE2Q6IQ49 451 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CAND1Q86VP6 1230 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 CHPFQ8IZ52 775 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 ZNF513Q8N8E2 541 aaPredicted RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 IL17RCQ8NAC3 791 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TMIEQ8NEW7 156 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 HNRNPLLQ8WVV9 542 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 ECHDC3Q96DC8 303 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 LRRC39Q96DD0 335 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 FEM1CQ96JP0 617 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 EXOC2Q96KP1 924 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 NSUN5Q96P11 429 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 SERPINB12Q96P63 405 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TRIB3Q96RU7 358 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 SLC30A3Q99726 388 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 HEPHQ9BQS7 1158 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TDRD1Q9BXT4 1180 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 TM6SF2Q9BZW4 377 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TNKS2Q9H2K2 1166 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 FBRSQ9HAH7 460 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CASS4Q9NQ75 786 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 DKK3Q9UBP4 350 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 MTRF1LQ9UGC7 380 aaKnown RBP8.07□□□□□ -1.12
COPS3-215ENST00000578317 NFU1Q9UMS0 254 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 TTLL3Q9Y4R7 772 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 RAI2Q9Y5P3 530 aa8.07□□□□□ -1.12
COPS3-215ENST00000578317 CHD5Q8TDI0 1954 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 KANSL1LA0AUZ9 987 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 CCDC151A5D8V7 595 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 KRBA1A5PL33 1030 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 CHURC1-FNTBB4DL54 471 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 ANKRD66B4E2M5 251 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 E7ESA3 106 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 PMPCBO75439 489 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 NDST3O95803 873 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 PRNPP04156 253 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 SERPINA4P29622 427 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 GRIA4P48058 902 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 LMAN1P49257 510 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 LIG3P49916 1009 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 ARL4CP56559 192 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 POLR2LP62875 67 aaKnown RBP8.06□□□□□ -1.12
COPS3-215ENST00000578317 CDH17Q12864 832 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 MSLNQ13421 630 aaPredicted RBP8.06□□□□□ -1.12
COPS3-215ENST00000578317 FZD5Q13467 585 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 HLTFQ14527 1009 aaKnown RBP eCLIP8.06□□□□□ -1.12
COPS3-215ENST00000578317 ELF2Q15723 593 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 SLC1A5Q15758 541 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 ATXN7L2Q5T6C5 722 aaPredicted RBP8.06□□□□□ -1.12
COPS3-215ENST00000578317 EMBQ6PCB8 327 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 DSG4Q86SJ6 1040 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 PDIK1LQ8N165 341 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 PHC3Q8NDX5 983 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 RHOVQ96L33 236 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 SRPK1Q96SB4 655 aaKnown RBP8.06□□□□□ -1.12
COPS3-215ENST00000578317 ACOX2Q99424 681 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 FMO2Q99518 471 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 C19orf43Q9BQ61 176 aa8.06□□□□□ -1.12
COPS3-215ENST00000578317 TBL1YQ9BQ87 522 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 225.2 ms