RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 NAIF1Q69YI7 327 aaPredicted RBP18.6■□□□□ 0.57
PRKCA-203ENST00000578063 BRAT1Q6PJG6 821 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 C4orf33Q8N1A6 199 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 C2CD4AQ8NCU7 369 aaPredicted RBP18.6■□□□□ 0.57
PRKCA-203ENST00000578063 OR13C4Q8NGS5 318 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 OR6P1Q8NGX9 317 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 LYSMD1Q96S90 227 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 PPIL1Q9Y3C6 166 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 WASF2Q9Y6W5 498 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 SZT2Q5T011 3432 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 ANKRD36A6QL64 1941 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 EDDM13A0A1B0GTR0 161 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 HMX2A2RU54 273 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 C2CD4DB7Z1M9 353 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 CTPS1P17812 591 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 HADHAP40939 763 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 SLC1A2P43004 574 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 SLC18A1P54219 525 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 POLR2LP62875 67 aaKnown RBP18.6■□□□□ 0.57
PRKCA-203ENST00000578063 E2F5Q15329 346 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 HNRNPA1L2Q32P51 320 aaKnown RBP18.6■□□□□ 0.57
PRKCA-203ENST00000578063 USP45Q70EL2 814 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 GALNT7Q86SF2 657 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 ZSWIM9Q86XI8 627 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 OR4K2Q8NGD2 314 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 GRIN3AQ8TCU5 1115 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 TBATAQ96M53 351 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 SMIM14Q96QK8 99 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 CDX2Q99626 313 aaPredicted RBP18.6■□□□□ 0.57
PRKCA-203ENST00000578063 MCMBPQ9BTE3 642 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 GPR63Q9BZJ6 419 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 RHOJQ9H4E5 214 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 KCNK9Q9NPC2 374 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 POLR3BQ9NW08 1133 aaPredicted RBP18.6■□□□□ 0.57
PRKCA-203ENST00000578063 IL36AQ9UHA7 158 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 FBXO5Q9UKT4 447 aa18.6■□□□□ 0.57
PRKCA-203ENST00000578063 MUC22E2RYF6 1773 aaPredicted RBP18.59■□□□□ 0.57
PRKCA-203ENST00000578063 TSPAN11A1L157 253 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 FAM47DPA6NHR8 397 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 STX7O15400 261 aaKnown RBP18.59■□□□□ 0.57
PRKCA-203ENST00000578063 BUD23O43709 281 aaKnown RBP18.59■□□□□ 0.57
PRKCA-203ENST00000578063 SLC4A1P02730 911 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 ALPIP09923 528 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 HMGCLP35914 325 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 TMPRSS15P98073 1019 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 ILF2Q12905 390 aaKnown RBP18.59■□□□□ 0.57
PRKCA-203ENST00000578063 ZNF234Q14588 700 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 AFTPHQ6ULP2 937 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 DENND6AQ8IWF6 608 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 PLCD3Q8N3E9 789 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 OTUD6BQ8N6M0 293 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 PPM1EQ8WY54 764 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 CDKN2AIPNLQ96HQ2 116 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 SERAC1Q96JX3 654 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 MCCC1Q96RQ3 725 aaPredicted RBP18.59■□□□□ 0.57
PRKCA-203ENST00000578063 TRPV5Q9NQA5 729 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 NKIRAS1Q9NYS0 192 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 PKP3Q9Y446 797 aa18.59■□□□□ 0.57
PRKCA-203ENST00000578063 CCDC162PA2VCL2 907 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 LEFTY1O75610 366 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 GOT2P00505 430 aaKnown RBP18.58■□□□□ 0.57
PRKCA-203ENST00000578063 CHN1P15882 459 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 NFKBIAP25963 317 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 HNF1BP35680 557 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 MDH1P40925 334 aaKnown RBP18.58■□□□□ 0.57
PRKCA-203ENST00000578063 CCNFP41002 786 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 SLC18A2Q05940 514 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 PTPRCAPQ14761 206 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 AAK1Q2M2I8 961 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 MRNIPQ6NTE8 343 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 SERPINA13PQ6UXR4 307 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 Q7L0L9 218 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 LYSMD3Q7Z3D4 306 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 PTAR1Q7Z6K3 402 aaPredicted RBP18.58■□□□□ 0.57
PRKCA-203ENST00000578063 GPR150Q8NGU9 434 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 HCAR2Q8TDS4 363 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 ACMSDQ8TDX5 336 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 SCG3Q8WXD2 468 aaKnown RBP18.58■□□□□ 0.57
PRKCA-203ENST00000578063 SCRN2Q96FV2 425 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 SGSM3Q96HU1 749 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 VPS39Q96JC1 886 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 KLHL32Q96NJ5 620 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 CAPS2Q9BXY5 557 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 TMEM245Q9H330 911 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 ZFYVE1Q9HBF4 777 aa18.58■□□□□ 0.57
PRKCA-203ENST00000578063 THAP10Q9P2Z0 257 aaPredicted RBP18.58■□□□□ 0.57
PRKCA-203ENST00000578063 C1orf232A0A0U1RR37 186 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 H7C0S8 307 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 CCL22O00626 93 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 TYROBPO43914 113 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 RFPL1O75677 317 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 PYGBP11216 843 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 FOSL2P15408 326 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 OGNP20774 298 aaKnown RBP18.57■□□□□ 0.56
PRKCA-203ENST00000578063 CD151P48509 253 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 MPP1Q00013 466 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 CTBP1Q13363 440 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 SH2D5Q6ZV89 423 aa18.57■□□□□ 0.56
PRKCA-203ENST00000578063 ZC3HC1Q86WB0 502 aaKnown RBP18.57■□□□□ 0.56
PRKCA-203ENST00000578063 CILP2Q8IUL8 1156 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms